LocARNA::ConfusionMatrix::SpanRangeBPFilter Class Reference

base pair range filter More...

#include <confusion_matrix.hh>

Inheritance diagram for LocARNA::ConfusionMatrix::SpanRangeBPFilter:

Collaboration diagram for LocARNA::ConfusionMatrix::SpanRangeBPFilter:

Public Member Functions
	SpanRangeBPFilter (size_t lo, size_t up)
	Construct with range. More...
	~SpanRangeBPFilter ()
	d'tor
bool	operator() (size_t i, size_t j) const
	check for span More...
Public Member Functions inherited from LocARNA::ConfusionMatrix::BPFilter
virtual bool	operator() (const bp_t &bp) const

Detailed Description

base pair range filter

Constructor & Destructor Documentation

LocARNA::ConfusionMatrix::SpanRangeBPFilter::SpanRangeBPFilter ( size_t  lo, size_t  up  )

inline

Construct with range.

Parameters

lo	lower bound
up	upper bound, if u>0; else if up==0, no upper bound

Member Function Documentation

bool LocARNA::ConfusionMatrix::SpanRangeBPFilter::operator() ( size_t  i, size_t  j  ) const

inlinevirtual

check for span

Parameters

i	left end
j	right end

Returns

whether span of bp (i,j) is in range

Reimplemented from LocARNA::ConfusionMatrix::BPFilter.

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The documentation for this class was generated from the following file:

• src/LocARNA/confusion_matrix.hh