Here is a list of all documented files with brief descriptions:
[detail level 123]
| ▼ src | |
| ▼ LocARNA | |
| aligner.hh | |
| aligner_impl.hh | |
| aligner_n.hh | |
| aligner_p.hh | |
| aligner_restriction.hh | |
| alignment.hh | |
| alignment_impl.hh | |
| alphabet.hh | |
| anchor_constraints.hh | |
| arc_matches.hh | |
| aux.hh | |
| basepairs.hh | |
| confusion_matrix.hh | |
| discrete_distribution.hh | |
| exact_matcher.hh | |
| ext_rna_data.hh | |
| ext_rna_data_impl.hh | |
| fitonoff.hh | |
| global_stopwatch.hh | |
| infty_int.hh | |
| match_probs.hh | |
| matrices.hh | |
| matrix.hh | |
| mcc_matrices.hh | |
| multiple_alignment.hh | |
| options.hh | |
| params.hh | |
| pfold_params.hh | |
| plusvector.hh | |
| ribofit.hh | |
| ribosum.hh | |
| rna_data.hh | |
| rna_data_impl.hh | |
| rna_ensemble.hh | |
| rna_ensemble_impl.hh | |
| rna_structure.hh | |
| scoring.hh | |
| scoring_fwd.hh | |
| sequence.hh | |
| sequence_annotation.hh | |
| sparse_matrix.hh | |
| sparse_vector.hh | |
| sparsification_mapper.hh | |
| stopwatch.hh | |
| stral_score.hh | |
| string1.hh | |
| trace_controller.hh | |
| tuples.hh | |
| type_wrapper.hh | |
| locarna.cc | Defines main function of locarna |
| locarna_p.cc | Defines main function of locarna_p |
| sparse.cc | Defines main function of SPARSE |
1.8.11
