LocARNA-1.8.11
scoring_fwd.hh
1 #ifndef LOCARNA_SCORING_FWD_HH
2 #define LOCARNA_SCORING_FWD_HH
3 
4 #ifdef HAVE_CONFIG_H
5 # include <config.h>
6 #endif
7 
8 #include "infty_int.hh"
9 
10 namespace LocARNA {
11 
13  typedef long int score_t;
14 
18 
20 
21 
23 #ifdef VERY_LARGE_PF
24  typedef long double pf_score_t;
25 #else
26  typedef double pf_score_t;
27 #endif
28 
29  class Scoring;
30 
31 } // end namespace LocARNA
32 
33 #endif // LOCARNA_SCORING_FWD_HH
34 
35 
InftyInt infty_score_t
Definition: scoring_fwd.hh:17
Definition: infty_int.hh:56
Definition: aligner.cc:17
double pf_score_t
type of partition functions
Definition: scoring_fwd.hh:26
Definition: infty_int.hh:344
Provides methods for the scoring of alignments.
Definition: scoring.hh:285
long int score_t
type of the locarna score as defined by the class Scoring
Definition: scoring_fwd.hh:13