Bioinformatics
Institute of Computer Science
University Freiburg
de

WCB 12: Workshop on Constraint Based Methods for Bioinformatics

WCB12 - Workshop on
Constraint Based Methods for Bioinformatics

September 8th, 2012


Program

8:30- Registration
10:30-10:55 Coffee Break
10:55-11:00 Workshop Opening
11:00-11:30 Search and Rescue: logic and visualisation of biochemical networks
Nicos Angelopoulos, Paul Shannon and Lodewyk Wessels
11:30-12:00 Qualitative Models of Cell Population Dynamics as Constraint Satisfaction Problems
Tom Kelsey and Steve Linton
12:00-12:30 An ASP Implementation of PhyloWS
Enrico Pontelli, Tran Cao Son, Tiep Le and Ngoc-Hieu Nguyen
12:30-13:00 Atom Mapping with Constraint Programming
Martin Mann, Heinz Ekker, Peter F. Stadler and Christoph Flamm
13:00-14:00 Lunch
14:00-14:30 Protein Loop Modeling via Constraints and Fragment Assembly
Federico Campeotto, Alessandro Dal Palu, Agostino Dovier,
Ferdinando Fioretto and Enrico Pontelli
14:30-15:30 Invited Talk: Christoph Flamm. Exploring Chemical Transformation Space
15:30-16:00 Coffee Break
16:00-17:00 Discussion: Future of WCB