LocARNA::BasePairFilter::BPMinLoopSize Class Reference

loop size base pair filter More...

#include <base_pair_filter.hh>

Inheritance diagram for LocARNA::BasePairFilter::BPMinLoopSize:

List of all members.

Public Member Functions
	BPMinLoopSize (size_t mls)
	constructor
	~BPMinLoopSize ()
	d'tor
bool	operator() (size_t i, size_t j) const
	check for minimum loop size

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Detailed Description

loop size base pair filter

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Constructor & Destructor Documentation

LocARNA::BasePairFilter::BPMinLoopSize::BPMinLoopSize

(

size_t

mls

)

[inline, explicit]

constructor

Parameters:

mls	minimum loop size

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Member Function Documentation

bool LocARNA::BasePairFilter::BPMinLoopSize::operator()	(	size_t	i,
		size_t	j
	)		const [inline, virtual]

check for minimum loop size

Parameters:

i	left end
j	right end

Returns:

whether bp (i,j) satisfies mls

Reimplemented from LocARNA::BasePairFilter::Filter.

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The documentation for this class was generated from the following file:

• src/LocARNA/base_pair_filter.hh