Reference sequence (1): Pisl_A_G_1_X_F16
Identities normalised by aligned length.
Colored by: consensus/70% and property
                                1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .     ] 246
 1 Pisl_A_G_1_X_F16    100.0%     -t---------------------------------------agacagccaaacgcgaagaatggcgctgggtctccgccatctctaaggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccgtctctcagacagaggaatgtatgaatgta-aagaggggttggaaagcgaccg--ccggccagacaaaaaaccacgaaaaaacttaaaaacccaaaagatccaaaaacacaag----cc    
 2 Tneu_A_G_4_X_F16     88.9%     -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccggagctcagacagaggaatatatgaatgta-aagggcggtggaaaagcgaccc--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc    
 3 Tneu_G_4_X_F16       88.9%     -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccggagctcagacagaggaatatatgaatgta-aagggcggtggaaaagcgaccc--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc    
 4 Tneu_A_G_2_X_F16     90.5%     -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctaaaaacacaag----cc    
 5 Tneu_A_G_3_X_F16     87.0%     ac---------------------------------------agaaacgcacacgcgaagaatggcgctgggttg-cgccttctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc    
 6 Tneu_G_3_X_F16       87.0%     ac---------------------------------------agaaacgcacacgcgaagaatggcgctgggttg-cgccttctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc    
 7 Pisl_A_G_3_X_F16     87.0%     ct---------------------------------------agacagccaaacgcgaagaatggcgctgggtta-cgcagtctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgcacgccggaacccagacaggagaatgtgtgaatgta-aaggggcgtttgaaagcgaccc--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccatagacacaag----cc    
 8 Pisl_G_3_X_F16       87.0%     ct---------------------------------------agacagccaaacgcgaagaatggcgctgggtta-cgcagtctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgcacgccggaacccagacaggagaatgtgtgaatgta-aaggggcgtttgaaagcgaccc--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccatagacacaag----cc    
 9 Tneu_A_G_7_X_F16     86.5%     tt---------------------------------------agaaagccgaaggcgaagaatggcgctgggtcg-cgccctctatgaggcggagttatgatggtagaggcgaagaatggcgcacgccgtctctcagacagaggaatgtgtgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc    
10 Tneu_G_7_X_F16       86.5%     tt---------------------------------------agaaagccgaaggcgaagaatggcgctgggtcg-cgccctctatgaggcggagttatgatggtagaggcgaagaatggcgcacgccgtctctcagacagaggaatgtgtgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc    
11 Pisl_A_G_5_X_F16     85.5%     ct---------------------------------------tgacagtcaaacgcgaagaacggcgctgggtca-cgccgtctctgaggcgttgtcacgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtatgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc    
12 Pisl_G_2_X_F16       79.0%     tt---------------------------------------gtgagggtagaggcgaagaacggcgctgggttc-tcccttcggctaggcgtagttacgatcgtaaaggcgaagaacggcgcacgccgtctctcagacaggagaatatatgaatgta-aagggcggtggaaaagcgaccc--ccggacaaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccacacaaacaag----cc    
13 Pisl_A_G_2_X_F16     79.0%     tt---------------------------------------gtgagggtagaggcgaagaacggcgctgggttc-tcccttcggctaggcgtagttacgatcgtaaaggcgaagaacggcgcacgccgtctctcagacaggagaatatatgaatgta-aagggcggtggaaaagcgaccc--ccggacaaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccacacaaacaag----cc    
14 Tneu_G_1_X_F16       79.5%     ac---------------------------------------ttaggataacaggcgaagaacggcgctgggttc-ttccttcggctaggcgtagttatgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtgtgaatgta-aagggcggtgggaaagcgaccc--ccgagccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc    
15 Tneu_A_G_1_X_F16     79.5%     ac---------------------------------------ttaggataacaggcgaagaacggcgctgggttc-ttccttcggctaggcgtagttatgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtgtgaatgta-aagggcggtgggaaagcgaccc--ccgagccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc    
16 Pys_0B_G_9_X_F16     64.0%     at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggttt-gggcgtctcttaagcatccagcccgccgccactgcgaagaatggcgtgcg-gctaaatcacacagcggaatatatgaatgta-aggcgctacccaaaagcgtcca--ccgaagagacaaaaaacagacgaaaaacttaaaaacacacaaaaaccgcaaaaaccag----cc    
17 P186_G_9_X_F16       64.0%     at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggttt-gggcgtctcttaagcatccagcccgccgccactgcgaagaatggcgtgcg-gctaaatcacacagcggaatatatgaatgta-aggcgctacccaaaagcgtcca--ccgaagagacaaaaaacagacgaaaaacttaaaaacacacaaaaaccgcaaaaaccag----cc    
18 Pys_0B_G_3_X_F16     62.5%     aa---------------------------------------ccgcccggcgtggcgaagaatggcgttgggtct-cggcgtctcttaaacattcggcccgccgccactgcgaagaatggcgcacg-gccaggccgaacagcggaatatatgaatgta-aaacgcggcaaaacagcgtcca--ccgaagagacaaaaagcagacgaaaaacttaaaaacccacaaaaaccatcaaaaccag-----c    
19 P186_G_3_X_F16       62.5%     aa---------------------------------------ccgcccggcgtggcgaagaatggcgttgggtct-cggcgtctcttaaacattcggcccgccgccactgcgaagaatggcgcacg-gccaggccgaacagcggaatatatgaatgta-aaacgcggcaaaacagcgtcca--ccgaagagacaaaaagcagacgaaaaacttaaaaacccacaaaaaccatcaaaaccag-----c    
20 Pys_0B_G_2_X_F16     63.5%     tt---------------------------------------gtgcacggcgcggcgaagaatggcgttgggcct-cggcgttttctcaacctccacgttgctgtgcttgcgaagaatggcggccg-cccaccccgaaaagagacatatatgaatgta-aaacgcggcagaaaagcgtcca--ccgaagatacaaaaaacctacaaaaaacttaaaaacccacaaaaaccaacaaaaccag----cc    
21 Pys_0B_G_1_X_F16     61.5%     at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggtct-cggctttctctacacctctggcccgccgcctctgcgaagaatggcgatcg-gcaagcctgaaaagagacatgtatgaatgta-aagcgtggcggaaaagcgtcca--ccgaagaagcaaaaaacagacgaaaaacttaaaaacccacaaaaacaatcaaaaccag----cc    
22 P186_G_1_X_F16       61.5%     at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggtct-cggctttctctacacctctggcccgccgcctctgcgaagaatggcgatcg-gcaagcctgaaaagagacatgtatgaatgta-aagcgtggcggaaaagcgtcca--ccgaagaagcaaaaaacagacgaaaaacttaaaaacccacaaaaacaatcaaaaccag----cc    
23 Paer2_A_G_2_X_F16    59.0%     ct---------------------------------------tctgtcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc    
24 Paer_G_2_X_F16       59.0%     ct---------------------------------------tctgtcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc    
25 Paer2_A_G_1_X_F16    58.5%     tc---------------------------------------ctcttcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc    
26 Paer2_A_G_7_X_F16    62.5%     gg---------------------------------------cgagatagtgcggcgaaaaacggcgttggatat-gcgccgtttctgccctctgccgttatcatcacggcgaaaaatgacatacg-ccgtcggcggacagggaaatatatgaatgta-aagtgagtgtgaaaaggcgctt--gccgcaagacaaaaaaccaaagaaaaacttaaaaacccaaaagaactttaaacgcaag----cc    
27 Pogu_0TE_G_2_X_F16   61.5%     cc---------------------------------------ctacccctcgcggcgaagaacggcgttgggtat-cgacgggttttgcggcttcgccttgcagacgccgcgaagaatggcgtgtg-ctgtcggcatacggcgatatatatgaatgta-aagcggggagagaaagaagccc--gccgagagacaaaaaaccaaagaaaaacgtaaaaaaccaaaagaactgtacacacgag----cc    
28 Tneu_A_G_10_M10_F3   40.4%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca    
29 Tneu_G_10_M10_F3     40.4%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca    
30 Tneu_A_G_9_M10_F3    40.4%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca    
31 Tneu_G_5_M10_F3      38.9%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggtcagctctagaaaaacaagcaaccca-gaaa-gagcagtctcaagaacaccccgaaatcaacacaaaaccccacagagaaaaacttaaaaaccaacaaaaaccaaaacccagaagaccca    
32 Tneu_A_G_5_M10_F3    38.9%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggtcagctctagaaaaacaagcaaccca-gaaa-gagcagtctcaagaacaccccgaaatcaacacaaaaccccacagagaaaaacttaaaaaccaacaaaaaccaaaacccagaagaccca    
33 Tneu_A_G_8_M10_F3    40.4%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggttagctctagaaaaaccaacaaccca-gaaa-gagcagtctcaagaacacgccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaacaaaaaccaaaacccagaaacccca    
34 Tneu_G_8_M10_F3      40.4%     ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggttagctctagaaaaaccaacaaccca-gaaa-gagcagtctcaagaacacgccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaacaaaaaccaaaacccagaaacccca    
35 Tten2_A_G_6_M10_F3   38.9%     ------------------------------------------tataaatcgccgtgcagaacaacggcgga----cggcgtcgccgacagtcaaacacgcg-ccttcaactgcgggacgcagggggccagttctagagaaatcagcagtccg-ggga-gagctatctcaagaacacgctgcaatcaacgcaaaacccaccagagaaaaacttaaaaacagccaaaaaccaaaacccagaaggcccg    
36 Tten2_A_G_7_M10_F3   37.9%     ------------------------------------------taaaaaacggcggacagaagtacggcgga----cggcggcgccgacagtaaaacacgcg-ctttcaactgccggaggcagaaggccagctgtggaaaagagacaaccccacccct-tagccaacacgagaacacgccagaactaacacaaaacccaccagagaaaaacttaaaaacagccaaaagccaaaacccagaaggcccg    
37 Tten_G_7_M10_F3      37.9%     ------------------------------------------taaaaaacggcggacagaagtacggcgga----cggcggcgccgacagtaaaacacgcg-ctttcaactgccggaggcagaaggccagctgtggaaaagagacaaccccacccct-tagccaacacgagaacacgccagaactaacacaaaacccaccagagaaaaacttaaaaacagccaaaagccaaaacccagaaggcccg    
38 Tten_G_5_M10_F3      30.5%     ------------------------------------------tataaatcgccgtgcggaagcacggcgct----cggcgatgccgagggtcggacgcacg-ctttcaactgccggacgcaggac-ccaaccgtgtagaacaggcaaagccctcccc-ggggcaacacaaggtcgcgccgggaccaagacaaagacccgcagaggaaaacttaaaaatcggcagaaactaaagaccaggaggcccg    
39 Tten2_A_G_5_M10_F3   30.5%     ------------------------------------------tataaatcgccgtgcggaagcacggcgct----cggcgatgccgagggtcggacgcacg-ctttcaactgccggacgcaggac-ccaaccgtgtagaacaggcaaagccctcccc-ggggcaacacaaggtcgcgccgggaccaagacaaagacccgcagaggaaaacttaaaaatcggcagaaactaaagaccaggaggcccg    
40 Tten2_A_G_4_M10_F3   33.0%     ------------------------------------------taaaaaacggcggacagaagtacggcgtt----cggcggcgccgacctccagccgcacg-ctttcaactgccggaggcgggat-ccgaccgcgtagaacagacaaagccctcccc-ggggcaacacaaggtcgcgccgggactaacacaaagacccacagaggaaaacttaaaaatcggcaaaaactaaagaccagaaggcccg    
41 Pogu_0TE_G_5_M10_F3  36.9%     ------------------------------------------tataaaacgccgtgcaagacaaagccgca----agacgccgccgaggaggaaaaacacg-cactcaactctcaga-acaagactaaaaccccagacccacacacaacacacaaga-aaacaaccacaacaacacgccaaacccagccaaaaacccacccaagaaaaacttaaaaacccacaaaaacaaaaacccagaaacccca    
42 Pars_G_3_M10_F3      36.9%     ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca    
43 Pars_G_2_M10_F3      36.9%     ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca    
44 Pars_A_G_2_M10_F3    36.9%     ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca    
45 Pars_A_G_3_M10_F3    36.9%     ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca    
46 Pogu_0TE_G_4_M10_F3  36.5%     ------------------------------------------tataaaacgccgtgcaggtcaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaataagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca    
47 Paer_G_3_M10_F3      36.5%     ------------------------------------------tataaatcgtcgtacaacaactcggcgca----ccccggcgccgagaggcaaaaaacgg-cattcaactaccgggaatagagt-caatctccagaataacagccacaaaccccta-aaaacgacacaagaaaaaaccgcctccaaagacaaaacaaaaggagaaaaacttaaaaacccccaaaaacacaaatccagagatccca    
48 Paer2_A_G_3_M10_F3   36.5%     ------------------------------------------tataaatcgtcgtacaacaactcggcgca----ccccggcgccgagaggcaaaaaacgg-cattcaactaccgggaatagagt-caatctccagaataacagccacaaaccccta-aaaacgacacaagaaaaaaccgcctccaaagacaaaacaaaaggagaaaaacttaaaaacccccaaaaacacaaatccagagatccca    
49 Pars_A_G_6_M10_F3    40.4%     ------------------------------------------tataaaacgtcgtgcagaaatacggtgcc----cggcggcgccgaggggttaaacacgg-cattcaactcccagctccacagc-caaactgccggcaaagaacaaaactgctcta-aaaccaccacgagggaaaaccgctcccaaaacaaaaccaaaagaaaaaaaacttaaaaacccacaaaaacaaaacaccagaaccccca    
50 Pcal_A_G_4_M10_F3    36.8%     ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgaaaatcaaaaacgca-ccttcaactatgccacaattgaaagaggcggcaaacaaaccactatactaataatagatcaagacatcaatggccccgtacgactcccagaaatcgccaaagaaaaacttaaaaactgccagaaacaaaaacccaggaagccca    
51 Pcal_A_G_6_M10_F3    35.3%     ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgagagttgaagatacg-ccttcaactattccacagttgaaagaggtggcagacaagccgtaagggatcaattctagtaaactcaaaagcacgccgcacaccctctaaaagacaccaaagaaaaacttaaaaactaacaaaaacaaatgcccaagaaaccca    
52 Pcal_G_6_M10_F3      35.3%     ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgagagttgaagatacg-ccttcaactattccacagttgaaagaggtggcagacaagccgtaagggatcaattctagtaaactcaaaagcacgccgcacaccctctaaaagacaccaaagaaaaacttaaaaactaacaaaaacaaatgcccaagaaaccca    
53 Pcal_A_G_5_M10_F3    35.5%     ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgaggtgcaaaaacacg-ccatcaactatgccacagttgaaagaagtagcgtacaagccgtaaggctccaatt-aaacaagctcaaaaacacgtcacacgctctctgaaatacaccaaagaaaaacttaaaaaccgccagaaacaaaaacccaggaagccca    
54 P186_G_5_M10_F3      34.5%     ------------------------------------------tataaaacgtcgtgcagacccacagcgaa----cggcgccgccgagctgttgccacacgacattcaactaccagaagccgctaggcacgctgacacaatgtagaaagacaaca---aaacacaagcaacaacaacacagcaatcactccaatactacacaagaaaaacttaaaaacccacaaaaaaccatgaccaggaacccca    
55 Pys_0B_G_5_M10_F3    34.5%     ------------------------------------------tataaaacgtcgtgcagacccacagcgaa----cggcgccgccgagctgttgccacacgacattcaactaccagaagccgctaggcacgctgacacaatgtagaaagacaaca---aaacacaagcaacaacaacacagcaatcactccaatactacacaagaaaaacttaaaaacccacaaaaaaccatgaccaggaacccca    
56 Pcal_A_G_7_M10_F3    23.4%     ccaatgagctcgcccaccctcctcacgtctgccttggccagctttacgatgtcgttccagagggccttgtacctacccctacgtcgccaatgaggcaaagg---------------------------------------------------------aagtgatcacgagaagtctctacatcgctccacaaaacagctaaagaaaaacttaaaaacaaccaaaaacgatacctaagaaaca-ta    
   consensus/90%                  ..........................................sussssssussGsusAGuAssusussGsu....sssCsssssssussssssssssssss.ssssssuCsusssussussssss.ssssssssusAsssssssssusssss.ss...uAusssssssuuuuussssCss..ssssssssusAAsssusssssuAAAAACTTAAAAACssssAuuAsCsussssssssuu....Cs    

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