Reference sequence (1): Smar2_A_G_1_X_F3 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . ] 167 1 Smar2_A_G_1_X_F3 100.0% at-cactcgaatatttttcattatacaaacccgtcaataccttaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaac-a-cgtattcgaactaat 2 Smar_G_1_X_F3 100.0% at-cactcgaatatttttcattatacaaacccgtcaataccttaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaac-a-cgtattcgaactaat 3 Smar_G_3_X_F3 94.5% ac-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaacaa-catattcgaaccaaa 4 Smar2_A_G_3_X_F3 94.5% ac-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaacaa-catattcgaaccaaa 5 Smar_G_13_X_F3 82.8% ca-tagtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcaatcgaatatgatcagtctaggaatt-aaatatagaaagcaatatata-ctggttcgaacaaaaaatacaaatgtagcaa-aaaattcgaaccaaa 6 Smar2_A_G_6_X_F3 82.8% ca-tagtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcaatcgaatatgatcagtctaggaatt-aaatatagaaagcaatatata-ctggttcgaacaaaaaatacaaatgtagcaa-aaaattcgaaccaaa 7 Smar_G_12_X_F3 80.4% at-tactcgaatatttttcattatacaaacttgtcaaggggtcagagatactattaagcctatagaaaactagtcgaacatgatcaat-tagggatc-gaatatagaaaaacatatata-acaattcgaacaaagaatataaacgtagcaa-ataattcgaaccaaa 8 Smar2_A_G_12_X_F3 80.4% at-tactcgaatatttttcattatacaaacttgtcaaggggtcagagatactattaagcctatagaaaactagtcgaacatgatcaat-tagggatc-gaatatagaaaaacatatata-acaattcgaacaaagaatataaacgtagcaa-ataattcgaaccaaa 9 Smar2_A_G_7_X_F3 84.0% ac-tagtcgaatgtttttcattatacaaacttgtcagggggtcagagatactattaagtctatagaaaactggtcgaacatgatcaac-caagaaca-aaatatagaaagcaatatata-ctggttcgaacaaaaaagataagtgtaacaa-cgtattcgaaccaaa 10 Smar_G_7_X_F3 80.4% ac-tagtcgaatgtttttcattatacaaacttgtcagggggtcagagatactattaagtctatagaaaactggtcgaacatgatcaac-caag-------------------------------------------------------------------------- 11 Smar_G_6_X_F3 80.4% ta-caatcgaatatttttcattgtacaaacttttcagggggtcggagatactattaagtctatagaaaactggtcgaacatgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaaaataaaatataaacgtaacaa-cgtattcgaaccaaa 12 Smar_G_11_X_F3 81.6% ac-cactcgaatgtttttcattatacaaacttgtcatggggtcggagatactattaaatctatagaaaactagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa 13 Smar2_A_G_11_X_F3 81.6% ac-cactcgaatgtttttcattatacaaacttgtcatggggtcggagatactattaaatctatagaaaactagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa 14 Smar2_A_G_4_X_F3 84.0% tg-tggtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaagtctatagaaaaccagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa 15 Smar_G_4_X_F3 84.0% tg-tggtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaagtctatagaaaaccagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa 16 Smar_G_5_X_F3 78.5% ac-tggtcgaatatttttcattatacaaactcgtcaaggggtcagagatactattaaaccaatagaaaatcactcgaacatgatcaat-caaggatc-aaatatggaaaaacatatata-acatttcgaacaaaaaagataaatgtagcaa-agtattcgaaccaat 17 Smar2_A_G_5_X_F3 78.5% ac-tggtcgaatatttttcattatacaaactcgtcaaggggtcagagatactattaaaccaatagaaaatcactcgaacatgatcaat-caaggatc-aaatatggaaaaacatatata-acatttcgaacaaaaaagataaatgtagcaa-agtattcgaaccaat 18 Smar_G_8_X_F3 79.8% ca-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactaataaaccaatagaaaaccagtcgaacacgatcaactaagaaacc-aaatatagaaaaacatatata-atgattcgaacaaaaagatataatgtagcaa-agaattcgaaccaaa 19 Smar2_A_G_8_X_F3 79.8% ca-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactaataaaccaatagaaaaccagtcgaacacgatcaactaagaaacc-aaatatagaaaaacatatata-atgattcgaacaaaaagatataatgtagcaa-agaattcgaaccaaa 20 Smar2_A_G_9_X_F3 82.8% ac-caatcgaatatttcccattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcactcgaatatgatcaac-cagggatc-taatatagaaagcaatatata-ctggttcgaacaaaaaa-ataaatgtaacaa-catattcgaaccaaa 21 Smar_G_9_X_F3 82.8% ac-caatcgaatatttcccattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcactcgaatatgatcaac-cagggatc-taatatagaaagcaatatata-ctggttcgaacaaaaaa-ataaatgtaacaa-catattcgaaccaaa 22 Shel_G_2_X_F3 76.2% ac-tggtcgaacatttatcattatacaaacccgtcaaggggtcagcgatactaataagcctatagataattgttcgaacaggatcaag-catggatc-aagtatggaaaagcatatatatgtggttcgaagaaaaactataaatgtaccaa-ggtattcgaaccaaa 23 Shel1_A_G_2_X_F3 76.2% ac-tggtcgaacatttatcattatacaaacccgtcaaggggtcagcgatactaataagcctatagataattgttcgaacaggatcaag-catggatc-aagtatggaaaagcatatatatgtggttcgaagaaaaactataaatgtaccaa-ggtattcgaaccaaa 24 Shel1_A_G_7_X_F3 73.2% ac-cagtcgaacacttatcattatacaaacccgtcggggggtcagtgatactattgaatctatagttggctgttcgaacacgaacag--cgcagatt-aatcatagaaaagcatatatatctggttcgaagaaaaacaaaaaatgtaacaa-cgtattcgaaccaaa 25 Shel_G_7_X_F3 73.2% ac-cagtcgaacacttatcattatacaaacccgtcggggggtcagtgatactattgaatctatagttggctgttcgaacacgaacag--cgcagatt-aatcatagaaaagcatatatatctggttcgaagaaaaacaaaaaatgtaacaa-cgtattcgaaccaaa 26 Shel_G_9_X_F3 70.1% acacaacccaatat------tcaaacaacacca-----accataaaaacaacctaaaccctatagaaaactggtcgaacacgaacaac-tatgaatcaaaatatagaaaaacatatatatctggttcgaacaaaaaataaaaacgtagcaattttattcgaaccaaa 27 Shel1_A_G_9_X_F3 70.1% acacaacccaatat------tcaaacaacacca-----accataaaaacaacctaaaccctatagaaaactggtcgaacacgaacaac-tatgaatcaaaatatagaaaaacatatatatctggttcgaacaaaaaataaaaacgtagcaattttattcgaaccaaa consensus/90% ss.susTCGAAsuTTTssCATTATACAAACssuTCussussTsuusGATACTAsTAAusCsATAGAsAAssusTCGAAsAsGAsCAus.sAsuuAss.sAssATuGAAAussATATATA.ssusTTCGAAsAuAsss.sssAAsGTAsC.A.sssATTCGAACsAAs |
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