Reference sequence (1): Tpha1_A_G_11_X_F2
Identities normalised by aligned length.
Colored by: consensus/70% and property
                              1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .     ] 216
 1 Tpha1_A_G_11_X_F2 100.0%     cttaagctcgcattccggcctgt----------------catcctcgcttcgcctgtcctgttacccggccttccataggtcgctcgccggcagaccccgggtattttcattctctgatggtgccgccgctggcggcatggtggtctatgaggaattgaaaccaggtcaaaaacctcctgcctggggttgaagcggtcc-----------------    
 2 Tpse_A_G_6_X_F2    45.2%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacagaagaatattgacagtttaactgctcaaaagatagc-----------------    
 3 Tbro_C_G_4_X_F2    44.2%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacaggtcaaacctggggcaaagacttacgacgggaaa-------------------    
 4 Tpse_A_G_4_X_F2    44.2%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacaggtcaaacctggggcaaagacttacgacgggaaa-------------------    
 5 Tpse_A_G_7_X_F2    46.2%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaaccctatcagctccggtggcaccccaaacgcaatagc-------------------    
 6 Tbro_C_G_5_X_F2    46.2%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaaccctatcagctccggtggcaccccaaacgcaatagc-------------------    
 7 Tpse_A_G_3_X_F2    45.3%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacctaatttgctttaagcttgttgctacaagatagaccttg---------------    
 8 Tbro_C_G_3_X_F2    45.3%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacctaatttgctttaagcttgttgctacaagatagaccttg---------------    
 9 Tita_A_G_4_X_F2    46.0%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctatgaggaattgaaactaaataaaccgagactcaaaaatcggctcaatgatg------------------    
10 THER1_G_3_X_F2     47.0%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactaaacttgaaaaatgcagcttttttcaagtttggtt------------------    
11 THER75_G_3_X_F2    47.0%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactaaacttgaaaaatgcagcttttttcaagtttggtt------------------    
12 THER75_G_2_X_F2    46.0%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactttttttatctccccgcatcggctgcgggttagttttc----------------    
13 THER1_G_2_X_F2     46.0%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactttttttatctccccgcatcggctgcgggttagttttc----------------    
14 Tpse_A_G_5_X_F2    39.4%     ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacgttttttgt------------------acatttcactatcaaggatttttctat    
15 Tcom1_A_G_11_X_F2  38.1%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacacgaaatgc------------------cgaagatcacatacatggccaaactga    
16 Tcom1_A_G_7_X_F2   40.8%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacac--------------ttccaccgccgagaacatgacatagatcgtcccg----    
17 Tcom1_A_G_10_X_F2  44.7%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaaccctgtt--ttcaggcttctataattcacaaccacctca----------------    
18 Tcom1_A_G_5_X_F2   47.2%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacccggtatattccggcgtccttgaacc-cgagcactata----------------    
19 Tcom1_A_G_8_X_F2   41.2%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacaa------------tgcttcgcaggatcaggaactgaatatacgatacag----    
20 Tcom1_A_G_6_X_F2   45.6%     cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacaaagtcggctggcgcgcctc-------gaggcgctgcaggagt-----------    
21 Ktus_0C_G_3_X_F2   30.2%     ---------------------------atgtggatggggaagcccaccacctccacccctatgagcagctgtctcatagg------gatggataaaagagccggctctggaagttctccagcgctg-ctccagcagt-tccggacctactggaaattcaacgaagaagaccttctactactatcatacgaggaggacagtgacatgaaagacctgt    
   consensus/90%                Cs..GTCTAsGAGTCGGGCTCusAGCACCAAGu.AAsAACGACCTssCTsCACCAGCCGCsG....GAsTATsssAs...............CusAsssGssCATTTTCATCsTCTGCTGGTGCsG.CATTsGCGGCATGGGuGTCTATuAGGAATTGAAACssssss..s.......ssss.......sssssuss...................    

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