Reference sequence (1): Tosh_A_G_1_M4_F8 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : ] 154 1 Tosh_A_G_1_M4_F8 100.0% --------taaacctcgcaaagagccctctattcgccttatgtatattccaac---------------------------------cttcatctttctcacaaaccc-cccttcagcacgcccgtccaggacgaggttctttagggggtaga-- 2 Tosh_A_G_2_M4_F8 97.3% --------taaacctcgcaaaaagccctctattcgccttatgtatattccaat---------------------------------cttcatctttctcacaaaccc-cccttcagcacgcccgtccaggacggggttctttagggggtaga-- 3 Tosh_A_G_5_M4_F8 92.7% --------taaacctcgcaaaaagccctttattcgccttatgtatattccaag---------------------------------cttcatctttctcacaaaccc-cctttcagcaagcctgtccaggacggggctctttagggggtaga-- 4 Ths_0CC_G_7_M4_F8 74.5% ---------aaaccccgcaaaacccccgttatacggcgtgtgtatattccaag---------------------------------cttcatctttctcacaaaccccccctctaagaaccccgtcctggacgggattatgagaggggtacc-- 5 Ths_0CC_G_5_M4_F8 74.5% ---------aaaccccgcaaaacccccgttatacggcgtgtgtatattccaag---------------------------------cttcatctttctcacaaaccccccctctaagaaccccgtcctggacgggattatgagaggggtacc-- 6 Ths_0CC_G_6_M4_F8 74.5% ---------aaaccccgcaaaacccccgttatacggcgtgtgtatattccaag---------------------------------cttcatctttctcacaaaccccccctctaagaaccccgtcctggacgggattatgagaggggtacc-- 7 Mrub2_A_G_1_M4_F8 49.1% ---------------------aaacgcactttttaccccagttatccacaggggggctgt---------------------ggataactccagtttctcataaataccccctccagcacccctgtacagcacggtgtttaacggggtatgct-- 8 Mrub2_A_G_2_M4_F8 49.1% ---------------------aaacgcactttttaccccagttatccacaggggggctgt---------------------ggataactccagtttctcataaataccccctccagcacccctgtacagcacggtgtttaacggggtatgct-- 9 Msil_A_G_3_M4_F8 53.6% ---------------------aaccccacttttcaccccacttatccacaggggggttgt---------------------ggataactccactttctcataaatccaccccttggcacctctgtacaggacggggttttgtggggtatgct-- 10 Msil_A_G_1_M4_F8 49.1% ---------------------atccccactttttaccccacttatccacaggggggctgt---------------------ggataactccactttctcataaatccaccccctggcgcctctgtacgggacggggttttgtggggtatgct-- 11 Trad_A_G_1_M4_F8 32.8% ---------------ccaacgtctagtccttttggggttatccacaggccaagctgtggataacttaggggg--------------------------tgtcaaatgacccctcaaaaaccccttgccagacggccctcccagagggtaga--- 12 Trad_A_G_5_M4_F8 34.4% ---------------cccgcgcctcgtccttttggggttatccacaggccaagctgtggataacttgggggg--------------------------tgtcaaatgacccctcaaaaaccccttgccagacggccctctcagagggtaga--- 13 Trad_A_G_11_M4_F8 33.6% ---------------cccgcgcctcgtccttttggggttatccacaggccaagctgtggataacttgaaggg--------------------------tgcaaattgacccctcgaaaaccccttgccagacggcccttccagagggtaga--- 14 Trad_A_G_8_M4_F8 34.1% --------------gcccgcacctcgtccttttggagttatccacaggccaagctgtggataacttgaggga--------------------------tgtcaaatga-ccctcaaaaaccccttgccagacgggcctcccagagggtaga--- 15 Trad_A_G_4_M4_F8 33.1% ----------------ccgcgcctcgtccttttggggttatccacaggccaagctgtggataacttgggggg-------------------------gtgtcaaatgacccctcaaaaaccccttgtaagacagctctcccaaagggtaga--- 16 Acyl_A_P_3_M4_F8 30.9% --------------tttcattagtttcagttggcagttaacccaaagccggaaatgaggt-------------------------tttttgagaggtctgccaaaatcccccctacagtctgctcctagactgtgtttcagatggcggg----- 17 Acyl_A_P_6_M4_F8 31.8% --------------tttcattagtttcagtaggcagttaacccaaagccggaaatgaggt-------------------------tttttgagaggtctgccaaaatcccccctacagtctgctcctagactgtgtttcagatggcggg----- 18 Acyl_A_G_20_M4_F8 32.7% --------------tttcattagtttcagttggcagttaacccaaagcctgaaatgaggt-------------------------tttttaagaggtctgccaaaatcgtctctagattccgcccccagattatgtttcagatggcggg----- 19 MICR11_P_6_X_F8 32.2% ----------------ttaatgagattatgtttcaattagtggggctgaaatgagggtgaaaa----------------------------agagtcccacgaaaatcttttgtagaaccctctgtccgtcaaggtttcagatggcggactttc 20 PSEU41_G_1_M4_F8 22.7% ---------------------gattgagagttttggacttttctggtgttgggcttttgt-------------------actaacatttaagcaagtccgcgcaggttggggctagaagtcagtctaggtcttggtttcagatacctgct---- 21 PSEU41_G_6_M4_F8 25.5% ---------------------gattgaggatttcgacctcttttcttgttgtgctgttgt-------------------actaacattttaaggggttcgcgcaggtagcgcctggaagtctttctgggtcttggtttcagatacctgcg---- 22 Onig_A_G_5_M4_F8 25.5% ----------------gttttagcgatttttgagagctgattttcggctctaagtgagat------------------------cagcatcagaggcggtcgcaaacgccttctgaaccctttactgggtaaggttttcaaaacttggtg---- 23 NOST3_G_15_M4_F8 26.8% cattttgagcatggcttaattgagaatgaatttccctttattgagaatttaaaaagtggt---------------------------------------gtcgatttgacgtctgaaatcctttccctgtaagcgcccctgagcgaaga----- 24 MICR11_P_4_M4_F8 29.1% ---------------ggtttgaagtatgtattttgctcaatttttgggaagatacgttgt------------------------agtttcctggctggtgtcgatttgtcgtctgaaaccctttctccataagggttcctcagcgaaga----- 25 Cepi_A_G_3_M4_F8 24.0% --ttttagctttcagcttattgacaaaaattttgagcttattgactattcaaaaagaggt-------------------------------------gcgtcgattggctgcctgaaacctgatcagggtaaagctccctgagcgaaga----- 26 Cepi_A_G_1_M4_F8 28.1% --taattacaatttacttattgcaaaaatttccctgcttattgactctttaaaaagaggt-------------------------------------gcgtcgatttacagcctgaaactcactcccaggaaggctccctcagcgaact----- 27 Onig_A_G_35_M4_F8 24.0% --ttgcaagcaactgagcttattgcaggttttacggtcttattgacaggtaaaaaatggt-------------------------------------gcgtcgatttgaggcttgaaaccctttctgggtaaggctccctggccgaaga----- 28 Apla1_A_G_22_M4_F8 21.8% ---------------------------------gaatttgctccccaaaaaaagggctgtaaagttttgtta-------agcaccttctacgtgctctcgcgcgatcgtaccttgaaaaccgcatactgtaaggtttccaaaggtatagg---- 29 Apla1_A_G_19_M4_F8 24.5% ---------------------------------gaatttactcgcgccaaacaagcctgtaaagttttgtta-------agcaccttctacgtgttctcgcgcaaacgcaccttgaaaaccgcatactgtaaggtttccaaaggtatagg---- 30 Apla1_A_G_23_M4_F8 26.4% ---------------------------------gaatttgcttcgacaaaaacagcctgtaaagttttgtta-------agcaccttctaggtatgctcgcgcaaacgcaccttgaaaaccccatactgcaacgtttccaaaggcatagg---- 31 Oacu_A_G_9_M4_F8 25.5% ------------------------------------tcttgccccgctaaagcagcgcgttaagttttgtaa-------agttgactctctgtactttggcgcgatcgcaccttgaaaactacatagtgcaagagtttcaacaggatagggtt- 32 Cepi_A_G_6_M4_F8 23.6% ---------------------------------taatttcttcgcgaattaagtacagggtagctttttaga-------ccagccttctccgtactcctgcgcgatcgcaccttcaaaactaaatacagcaagggtttcaaaaccatagg---- 33 NOST1_G_2_M4_F8 28.2% ------------------------aaaagcttttgatttatcactactgagtgtataaactac----------------aatagcttttgcgtacctcggcgcaactgaaccttgaaatctaaatatagtaatagtttccaaagggtagg---- 34 SYNE10_G_8_M4_F8 21.8% ---------------------------------gcttgcgcttatccccaagagcaatgttaacatctatgt-------cacgaagtctccgtactccctcgcgaacgcaccttgaaaactgcatggattcaagcttttccgggggtagg---- 35 SYNE10_G_4_M4_F8 22.7% ---------------------------------gcttgcgcttggccgcgaggacaatgttaacatctgtgt-------cgaggaatctccgtactccctcgcgaacgcaccttgaaaacctcatgaattcaggcttttccgagggtagg---- 36 SYNE12_G_3_M4_F8 23.6% ---------------------------------acttgcgcttatccggcgaagcagtgttaatatctgttt-------cgggaagtctccgtactccctcgcaaacgcaccttgaaaaccttatggattcagccttttccgggggtagg---- 37 SYNE12_G_2_M4_F8 25.5% ---------------------------------acttgcgcttatccgccaaaccaatgttaatatctgtgt-------cgggaagtctccgtactccctcgcaagcgcaccttgaaaacctcatgagttcaggcttttccgggggtagg---- 38 Gkil_A_G_2_X_F8 20.0% ------------------------------------acagtccccgcaaaaggcagatgttacgcttcgtaa--------agccgtgtaacgcggcctcgcgcaatcgaaccttgaaacctttatactgagcccatgttaagacgatagggttc 39 SYNE4_P_2_M4_F8 29.1% --------------------------------gctttttattgttatgttttcagtacgtaacaaatcgtta--------aacgtctacctcttgtttggcggattggcacctcgaaaaccgcatacagactgtttttcagtgtgatagg---- 40 Capo_A_G_4_M4_F8 28.2% -------------------------------ccttttttaccttgataaagaaatagtgttaagaagtgtaa--------agcataattttgtattttttcgcatacactttgtataagcaagatgcagtaaagatttccaaaggtagg----- 41 RIVU_G_19_X_F8 22.7% -------------------------------------------tcagacgacgaaaatggcaattttctcgaaatatttttccattttttcgagatgcgtcgattggggtattccaaacccctgctgtgtaagggttctagaagtgaactcat- consensus/90% .................................sssssssssssssssssuss.............................................sssssussssssssssuusussssssssssussssssssssssssssssss..... |
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