Reference sequence (1): Nalb1_A_G_24_M1_F1 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . ] 200 1 Nalb1_A_G_24_M1_F1 100.0% --------------------------------------ctgcctaaacatcaggtgtccacactcatgggggaacgcccgaggtcgtccgctgccgagggtg-------------------------------------------------------------------------------------------------- 2 Nalb1_A_G_25_M1_F1 5.0% ---------------------------------gtggccgaagggtgtctgttttgtctgtttctcaac---------------------------------aacttgcagaaatgg--------------------------------------cgggttggc--tgggataacgttgcaggtcaggaaga-------- 3 Nalb1_A_G_26_M1_F1 4.2% ---------------------------------gtggttgaggggtgtctgttttgtctgtttctcaac---------------------------------aacgtgcagaaatgg--------------------------------------cgggttggc--cgggatagcgttgcaggtcaggaaga-------- 4 Nalb1_A_G_12_M1_F1 5.0% ---------------------------------ggggtcgaggggtgccggttttgtctgtttctcgac---------------------------------aacgtgcagaaatga--------------------------------------cgggtcggt--cgggatagcgttgcaggtcaggaaga-------- 5 Nalb1_A_G_35_M1_F1 5.0% --------------------------------atgattgggggagtgtctgttttgtctgtttcttgac---------------------------------aacttgcaaaaatgg--------------------------------------cgggttggc--cgggatggcgttgcaggtcaggaaga-------- 6 Nalb1_A_G_4_M1_F1 6.0% ---------------------------------gtggttgcgggatgtctggtttgtctgtttttcaac---------------------------------aacgtgcagaaatga--------------------------------------cgggtctgc--tggggtagcgtcgcaggtcagga----------- 7 Nalb1_A_G_3_M1_F1 6.1% ---------------------------------gcggtcgagaagtgccggttttgtctgtttttcaac---------------------------------aacatgcagaaatga--------------------------------------cgggtctgc--tggggtaacgtcgcaggtcaga------------ 8 Nalb1_A_G_34_M1_F1 3.6% ---------------------------------gtgattgaggggtgtcggttttgtctgtttctcgac---------------------------------aacttgcaaaaatgg--------------------------------------cgggtccacaccgcctcggcgtcgcccg----------------- 9 Ndas_B_G_12_M1_F1 7.8% -----------gtggttggtgagtttttggttctcttggggcctgtggtgcgtgtgtctgtttctgaag---------------------------------aagttggaaattcgg--------------------------------------ctgcttgcc--gctggtaagttcgcaggtcattgact-------- 10 Ndas_B_G_9_M1_F1 7.6% --------gtgggaggtgagttgttttgggtgctttgatggattgtggtgcgggtgtccgtctctgaag---------------------------------aagttggaaaaacgg--------------------------------------ccgcttgcc--actggtaagttcgcaggtcgttgact-------- 11 Ndas_B_G_10_M1_F1 5.1% --------------gcggacatggtcttcccagggctgagtgcgtcgtccgttttgtctgcttctgaag---------------------------------aagttggaaaaacgg--------------------------------------ctgcttgcc--actggtaagttcgcaggtcgttgact-------- 12 Ndas_B_G_11_M1_F1 4.3% --------------gcgggcatggtcttcctggggctgagcgcgccgtccgttttgtctgtttctgaag---------------------------------aagttggaaaaacgg--------------------------------------ctgcttgcc--actggtaagttcgcaggtcgttgact-------- 13 Ndas_B_G_7_M1_F1 7.6% --------acggtcgttaggggagttgtggggcgtttgggttttatggggtcggtgtctgtttttcggg---------------------------------aagttggaaaaacag--------------------------------------gcgcttgcc--actggtaagttcgcaggtggttgact-------- 14 Ndas_B_G_20_M1_F1 6.5% --------------gaaaccatgggatggttcggacttggctctgtgggtgaaatgcctgtttctcggg---------------------------------aagttggaaattcgg--------------------------------------ctgcttgtc--gctggtaatttcccaggtcagtgact-------- 15 Sgri5_A_G_8_M1_F1 11.3% -------------------------------------ccaaccagagggcgatatgtccatttctcggg---------------------------------aagttgtcaaaaagc--------------------------------------accacgcgc--ctgagtaaacccgcaggtcacggact-------- 16 Tbis_A_G_9_M1_F1 7.3% ccggccgatcacagctgacaggcaacgaaacctagagctttacatagtccaaaatgtcggaatctttga---------------------------------aagtggtcagaaacc--------------------------------------gcggccgcg--cgacatgaaagcgcaggtcgcggag--------- 17 Tbis_A_G_8_M1_F1 6.6% cccatcgagaacgaccgtcccccagctacgaccccctctcctaatagtccaaaatgtccgatcctctga---------------------------------aagtggtggaaatcc--------------------------------------gcgcctgcg--cgcgataaacgcgcaggtcgggaagc-------- 18 Tbis_A_G_15_M1_F1 6.6% -tcagataaatacactaactaccgaagggcactttttatcctaaatgtactgtatgcccaaattggcga---------------------------------aagtggtcgagactc--------------------------------------gcacctgcg--cgatctaaacgcgcaggtcgcggaggg------- 19 Srap1_G_5_M1_F1 6.8% -------------------gtaggcgagcccaataatgagccaaatcgccgaattgtcggaatcggtaa---------------------------------aagtatgggaaacgg--------------------------------------gcctctgtg--cacgctgaacccgcaggccacgcagt-------- 20 Tcur_A_G_16_M1_F1 10.9% -----------------------gcggcggaggacgacagagcgacgcccgatatgtccagattgaaag---------------------------------aagtaatgaattcca--------------------------------------gcattatcc--tgagataaacctgcaggtcagcaagt-------- 21 Shyg_0F_P_7_M1_F1 5.7% ------------gcggtgacggcagcccgtctcgaaagtgcgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 22 Shyg_B_P_5_M1_F1 5.7% ------------gcggtgacggcagcccgtctcgaaagtgcgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 23 Shyg_0F_P_9_M1_F1 5.7% ------------gcggtgacggcagcccgtctcgaaagtgcgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 24 Shyg_0F_P_6_M1_F1 5.7% ------------gcggtgacggcagcccgtcttgaaagtgtgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 25 Shyg_0F_P_8_M1_F1 5.7% ------------gcggtgacggcagaccgtctccaaagtgcgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agtcgatgg--cgcggtaagaatgcaggtcagtgagt-------- 26 Shyg_B_P_6_M1_F1 5.7% ------------gcggtgacggcagaccgtctccaaagtgcgcttcggttggtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agtcgatgg--cgcggtaagaatgcaggtcagtgagt-------- 27 Shyg_0F_P_3_M1_F1 6.4% -----------acgggtgacggcagtccgtcttggaagcgtgctttgggttgtatgccggattcggtga---------------------------------aagtcatggaagagg--------------------------------------agtcgatgg--cgcagtaagaatgcaggtcagtgagt-------- 28 Shyg_0F_P_2_M1_F1 3.5% -----------gaggatgaagaatatttgccctgtaagcatgttttggcctgtatgccggattcggcaa---------------------------------aagtcatgaagagga--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 29 Shyg_0F_P_4_M1_F1 8.7% -------------------------------------atcgccgaaggcagaggctggggattcggtga---------------------------------aactcgcgagtgtgg--------------------------------------agccgatgg--cgcggtaagaatgcaggtcagtgagt-------- 30 STRE34_P_2_M1_F1 8.9% -----------------gctgcttggggtgtcatttagggcgatagaagcggtttgtcgaaatcgatga---------------------------------aagtgctgcagaacg--------------------------------------tctctcttc--gctgacaaaatcgcagttcagcaaga-------- 31 Sfla1_A_P_2_M1_F1 4.8% -------gcagccaaggcgacatgttctgatgcgctgggatgaaatggtggctttgtcggattcggtga---------------------------------aagtcatgcagaatg--------------------------------------acgctctcg--gatgacaaactcgcagttcagcaaga-------- 32 STRE34_P_3_M1_F1 4.8% -------gcagccaaggcgacatgttctgatgcactgggatgaaatggtggctttgtcggattcggtga---------------------------------aagtcatgcagaacg--------------------------------------acgctctcg--gatgacaaactcgcagttcagcaaga-------- 33 STRE34_P_4_M1_F1 7.6% --------------------gcagtgcagggcgaattgggcttagagagggaaatgcccgaatcaatga---------------------------------aagtgcatcagaatg--------------------------------------ggctcgacc--gctgatagaactgcaggtcagtcagt-------- 34 Srap1_G_2_M1_F1 9.0% ------gaagccgaagaatttgcggggtggatctcgaaatacatatgcccggaatgccgggcttcgtga--------------------------------------------------------------------------------------gggacctgctgccagatagacatgcaggtcacggagt-------- 35 Srap1_G_8_M1_F1 8.3% --------------------aatctcggaagaggtgggaaacctatgtctggtatgccggaatttggga---------------------------------aagtgctctgcgaac--------------------------------------cgcctgttg--gcagatagacatgcaggtcagggagc-------- 36 Cjei_A_G_2_M7_F1 6.0% ---atgcgcggaggaggtaaagcgtcggtgatcgttcgctagtccggtaggcggtggtgaaaac----a---------------------------------agctgaagtagaatt--------------------------------------ggcccaacg--gctcaaagaaccacagctcagagagt-------- 37 Srap1_G_6_M1_F1 20.0% -----------------------------------------------------------gcacccgcggggatggtcccggggtggtgatcatgccctNNNNNNNNNNNNNNNNNNN--------------------------------------NNNNNNgggtggtgatcatgccctcgggcatgcggat-------- 38 Srap1_G_3_M1_F1 8.5% -----------------------accgatgtggggtgctccgctgccatccggatggcccgagcggaga--------------------------------------------------------------------------------------agaccgtcctccccgccgacgtccccgggggtgcggatc------ 39 Nalb1_A_G_13_M1_F1 5.8% --------------gcgcacgcggggatgggacgttccccccgagtagtggacatctccgacactggta---------------------------------acacgaggaggatgg-----------------------------------------------accccggtaccggcccgccccatggtgtatgaggag 40 Cres_A_G_6_M7_F1 8.1% ------------------------------acaatcgcaccgcaggtgcccgattgtgctcccccgcgt---------------------------------gagctgagcggggat--------------------------------------gagc-------ccaggcgaatcccccggccaccaaatccttgcc- 41 Scoe1_A_P_1_M1_F1 6.3% ---------------------------------atcggtaggcggtccgcagcacatcggcgtcagccg---------------------------------tacggcggaacaatt--------------------------------------caccccctg----gactccgcccgcgggcgt-------------- 42 Nalb1_A_G_14_M1_F1 5.3% ----------------------------------------gtgttggtgagttctggtcggttctgtgg---------------------------------ggctgtggtagggatgggtgaggagcggaggccgcttcgtggtgaaggttgcgggaagataacgtctcgcatcgtcccaggtcattaagt-------- 43 Tcur_A_G_10_M1_F1 16.7% --------------------------------------------acgccaagcgagcaggacttcaccttcgtcgccttcgacttcgcccgggaagataacgaattggtaaggt----------------------------------------------------gctgacattgccccaggtcagcaagt-------- 44 Tcur_A_G_9_M1_F1 18.3% -----------------------------------------------atcgacttcgacggcctgaccctcatcgccctcaaccccgccgagccggataacgaatcggtaaacc----------------------------------------------------cctagtatcgccccaggtcagcaagg-------- 45 Cter3_A_G_5_M1_F1 5.3% --------------------gtggtccagggcatcacgtatgcgcaaggcagctcgtcggcgt---------------------------------------aagtgatgtaagttc--------------------------------------tactcatgg--gatcgtaaacatgctgttcaggtagc-------- 46 Nmul2_A_G_10_M1_F1 6.4% ----------tcgccccgggatcaaacccccacccagcttcaaagcgaagagcccgtttgtcccggtga---------------------------------aggtgtccgaaacaa--------------------------------------gc------------------------------------------- 47 Shyg_0F_P_5_M1_F1 6.3% --------------------cgaatcgggggtgtcgcatgcgacacgcccgcgacaccaccagctgcgg--------------------------------------------------------------------------------------cggtgtcggcgcggcatccaaccccagctcctccgccagcagcat 48 Paci3_A_G_11_M1_F1 5.6% -----------------------------------agaactgcggggaccgaccgatggagcccggtag---------------------------------actttgatgggataactctggt-------------------------------tgctcgccgtcgcatgcgaaagccgtagtcaacaagt-------- 49 Afer1_A_G_3_M7_F1 5.7% --------------------------------------aaagtcgtaggcggcacatgggagcccgtgg---------------------------------actttgagggacttacacttat-------------------------------tcgcaagcccagccggtaaacatccatgtggtgaagt-------- 50 Vmar2_A_G_4_M7_F1 14.7% -----------------------gctggaccccggctaccagcaggcgaccggacacataaccccacag----------gaagcaagaggatcttgcaagtgaagtaaagaaaatca--------------------------------------gctcacttg--atctctagaaccacaggtcaggaagt-------- 51 Sare2_A_G_6_M1_F1 21.7% -------------------------------------aacgccgcaggttcggccgtcggaccccacaa-gcacctaacgaagtagcgacgagcctgaaccaaagtgaaggaaaaaa--------------------------------------cagtagttg--atcttcaaagccccagctcaagtagt-------- 52 Svir_A_G_6_M7_F1 10.9% ------------------------ccggaggaaagcgaggtgcgaaccccaccctgtcgcatcatgcag------------------------ccatgaacgtactgaatgaaatta--------------------------------------acggcttgc--ctcgttaaaatcccagctcaacaagt-------- 53 Svir_A_G_2_M7_F1 7.8% ------------------------gtggttcgacgcactcaccactgtttgacacgagtgatccgctgattgacaa---------------------ctccatactgaatgcaaatc--------------------------------------gggttaccg--tccggtagaaccgctggtcaacaagt-------- 54 Caci_A_G_17_M1_F1 6.5% --------------gcggctactccgcctcgctcgacttcccgattgacacgtatgcccgaatctgcgg---------------------------------aacccaacggcagcc--------------------------------------gcatctcag--cccgatagacaagcacgtgaagcaga-------- 55 Paci3_A_G_13_M1_F1 6.5% acggcatcggtacgccgccggatctccttgttcagccgctcctgaggattgttcgaccagatctggcgc--------------------------------------------------------------------------------------cacacggcgaccgggaggagcgcctggtcgatggcct-------- 56 Cure_B_G_4_M7_F1 9.4% ------------------------tcaattgagacggaagtacgagggccggtaattcggcactgggggtggcttcgtac----------------------agttgaagctagaat--------------------------------------gaggcttgg--gctcgaatatccgctgatcatacagt-------- 57 Nalb1_A_G_22_M1_F1 22.0% --------------------------------------------gtagtcgggtgagccgatccaccaggtggccccaggaagtagtgaccgggccgtgctgagacgggaagacggg--------------------------------------tccgggacgcgtactgaacagccgccg------------------ 58 Nalb1_A_G_15_M1_F1 8.1% --gcggtgaggaggaggcctcagagatgcctactgatgtacccgaccactgacatggtcgtatccgctg--------------------------------------------------------------------------------------ttatcttcgcgaccgttaacacctcggtagtacagg--------- 59 Nmul2_A_G_8_M1_F1 7.5% ---------------------------------------------------------------------acgatcgttgcgaggtgggtcagttttcaaccggaccagctgggtcag--------------------------------------gattcacccggaaccgacagcctccacgaagacggacggcagtta 60 Nmul2_A_G_9_M1_F1 12.6% ------------------gaaggtggggccacttcaaaccgtcacgcctcgacctgccgacaccggtggtgg------------------------------ggccaagtcgaaccg--------------------------------------ccaacccggggccagatcagactgtcagggccagag--------- 61 Cdip_E_G_1_M7_F1 3.5% ------------------------------------------------ggtgaatggctgatcctaaaa---------------------------------cagtagaaataaagatgaagcagaaaaattgctgaaacaaagttatatgtaataagctctaactggctctaaacgtgcagcttgataagt-------- 62 Cdip_C_G_1_M7_F1 3.5% ------------------------------------------------ggtgaatggctgatcctaaaa---------------------------------gagtagaaataaagatgaagcagaaaaattgctgaaacaaagttatatgtaataagctctaactggctctaaacgtgcagcttgataagt-------- 63 Cdip_D_G_1_M7_F1 2.8% ------------------------------------------------ggtgaatagctgatcctaaaa---------------------------------cagtagaaataaagatgaagcagaaaaattgctgaaacaaagttatatgtaataagctctaactgtctctaaacatgcagcttgataaga-------- 64 Tbis_A_G_14_M1_F1 4.3% -----------------------gcaagcgcccgcaatgctccccgggcgcgttcgcctgacgctccga---------------------------------ccctgctgtgatcag--------------------------------------agctgggctgcggagacatggccctcagcgggaaatcaaggaggt consensus/90% 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