Reference sequence (1): Smar2_A_G_1_X_F3
Identities normalised by aligned length.
Colored by: consensus/70% and property
                              1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .      ] 167
 1 Smar2_A_G_1_X_F3  100.0%     at-cactcgaatatttttcattatacaaacccgtcaataccttaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaac-a-cgtattcgaactaat    
 2 Smar_G_1_X_F3     100.0%     at-cactcgaatatttttcattatacaaacccgtcaataccttaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaac-a-cgtattcgaactaat    
 3 Smar_G_3_X_F3      94.5%     ac-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaacaa-catattcgaaccaaa    
 4 Smar2_A_G_3_X_F3   94.5%     ac-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactattaagtctatagaaaactggtcgaacacgatcaatctaggaatt-aaatatagaaagaaatatata-gtggttcgaacaaaaaagataaatgtaacaa-catattcgaaccaaa    
 5 Smar_G_13_X_F3     82.8%     ca-tagtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcaatcgaatatgatcagtctaggaatt-aaatatagaaagcaatatata-ctggttcgaacaaaaaatacaaatgtagcaa-aaaattcgaaccaaa    
 6 Smar2_A_G_6_X_F3   82.8%     ca-tagtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcaatcgaatatgatcagtctaggaatt-aaatatagaaagcaatatata-ctggttcgaacaaaaaatacaaatgtagcaa-aaaattcgaaccaaa    
 7 Smar_G_12_X_F3     80.4%     at-tactcgaatatttttcattatacaaacttgtcaaggggtcagagatactattaagcctatagaaaactagtcgaacatgatcaat-tagggatc-gaatatagaaaaacatatata-acaattcgaacaaagaatataaacgtagcaa-ataattcgaaccaaa    
 8 Smar2_A_G_12_X_F3  80.4%     at-tactcgaatatttttcattatacaaacttgtcaaggggtcagagatactattaagcctatagaaaactagtcgaacatgatcaat-tagggatc-gaatatagaaaaacatatata-acaattcgaacaaagaatataaacgtagcaa-ataattcgaaccaaa    
 9 Smar2_A_G_7_X_F3   84.0%     ac-tagtcgaatgtttttcattatacaaacttgtcagggggtcagagatactattaagtctatagaaaactggtcgaacatgatcaac-caagaaca-aaatatagaaagcaatatata-ctggttcgaacaaaaaagataagtgtaacaa-cgtattcgaaccaaa    
10 Smar_G_7_X_F3      80.4%     ac-tagtcgaatgtttttcattatacaaacttgtcagggggtcagagatactattaagtctatagaaaactggtcgaacatgatcaac-caag--------------------------------------------------------------------------    
11 Smar_G_6_X_F3      80.4%     ta-caatcgaatatttttcattgtacaaacttttcagggggtcggagatactattaagtctatagaaaactggtcgaacatgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaaaataaaatataaacgtaacaa-cgtattcgaaccaaa    
12 Smar_G_11_X_F3     81.6%     ac-cactcgaatgtttttcattatacaaacttgtcatggggtcggagatactattaaatctatagaaaactagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa    
13 Smar2_A_G_11_X_F3  81.6%     ac-cactcgaatgtttttcattatacaaacttgtcatggggtcggagatactattaaatctatagaaaactagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa    
14 Smar2_A_G_4_X_F3   84.0%     tg-tggtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaagtctatagaaaaccagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa    
15 Smar_G_4_X_F3      84.0%     tg-tggtcgaatgtttttcattatacaaacccatcaatacctcaaagatactattaagtctatagaaaaccagtcgaacacgatcaat-tagggatc-aaatatagaaaaacatatata-acaattcgaacagattaaataaatgtaacaa-cgtattcgaaccaaa    
16 Smar_G_5_X_F3      78.5%     ac-tggtcgaatatttttcattatacaaactcgtcaaggggtcagagatactattaaaccaatagaaaatcactcgaacatgatcaat-caaggatc-aaatatggaaaaacatatata-acatttcgaacaaaaaagataaatgtagcaa-agtattcgaaccaat    
17 Smar2_A_G_5_X_F3   78.5%     ac-tggtcgaatatttttcattatacaaactcgtcaaggggtcagagatactattaaaccaatagaaaatcactcgaacatgatcaat-caaggatc-aaatatggaaaaacatatata-acatttcgaacaaaaaagataaatgtagcaa-agtattcgaaccaat    
18 Smar_G_8_X_F3      79.8%     ca-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactaataaaccaatagaaaaccagtcgaacacgatcaactaagaaacc-aaatatagaaaaacatatata-atgattcgaacaaaaagatataatgtagcaa-agaattcgaaccaaa    
19 Smar2_A_G_8_X_F3   79.8%     ca-tagtcgaatgtttttcattatacaaacccgtcaatacctcaaagatactaataaaccaatagaaaaccagtcgaacacgatcaactaagaaacc-aaatatagaaaaacatatata-atgattcgaacaaaaagatataatgtagcaa-agaattcgaaccaaa    
20 Smar2_A_G_9_X_F3   82.8%     ac-caatcgaatatttcccattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcactcgaatatgatcaac-cagggatc-taatatagaaagcaatatata-ctggttcgaacaaaaaa-ataaatgtaacaa-catattcgaaccaaa    
21 Smar_G_9_X_F3      82.8%     ac-caatcgaatatttcccattatacaaacccatcaatacctcaaagatactattaaaccaatagaaaatcactcgaatatgatcaac-cagggatc-taatatagaaagcaatatata-ctggttcgaacaaaaaa-ataaatgtaacaa-catattcgaaccaaa    
22 Shel_G_2_X_F3      76.2%     ac-tggtcgaacatttatcattatacaaacccgtcaaggggtcagcgatactaataagcctatagataattgttcgaacaggatcaag-catggatc-aagtatggaaaagcatatatatgtggttcgaagaaaaactataaatgtaccaa-ggtattcgaaccaaa    
23 Shel1_A_G_2_X_F3   76.2%     ac-tggtcgaacatttatcattatacaaacccgtcaaggggtcagcgatactaataagcctatagataattgttcgaacaggatcaag-catggatc-aagtatggaaaagcatatatatgtggttcgaagaaaaactataaatgtaccaa-ggtattcgaaccaaa    
24 Shel1_A_G_7_X_F3   73.2%     ac-cagtcgaacacttatcattatacaaacccgtcggggggtcagtgatactattgaatctatagttggctgttcgaacacgaacag--cgcagatt-aatcatagaaaagcatatatatctggttcgaagaaaaacaaaaaatgtaacaa-cgtattcgaaccaaa    
25 Shel_G_7_X_F3      73.2%     ac-cagtcgaacacttatcattatacaaacccgtcggggggtcagtgatactattgaatctatagttggctgttcgaacacgaacag--cgcagatt-aatcatagaaaagcatatatatctggttcgaagaaaaacaaaaaatgtaacaa-cgtattcgaaccaaa    
26 Shel_G_9_X_F3      70.1%     acacaacccaatat------tcaaacaacacca-----accataaaaacaacctaaaccctatagaaaactggtcgaacacgaacaac-tatgaatcaaaatatagaaaaacatatatatctggttcgaacaaaaaataaaaacgtagcaattttattcgaaccaaa    
27 Shel1_A_G_9_X_F3   70.1%     acacaacccaatat------tcaaacaacacca-----accataaaaacaacctaaaccctatagaaaactggtcgaacacgaacaac-tatgaatcaaaatatagaaaaacatatatatctggttcgaacaaaaaataaaaacgtagcaattttattcgaaccaaa    
   consensus/90%                ss.susTCGAAsuTTTssCATTATACAAACssuTCussussTsuusGATACTAsTAAusCsATAGAsAAssusTCGAAsAsGAsCAus.sAsuuAss.sAssATuGAAAussATATATA.ssusTTCGAAsAuAsss.sssAAsGTAsC.A.sssATTCGAACsAAs    

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