Reference sequence (1): pHmar4_P_2_X_F12
Identities normalised by aligned length.
Colored by: consensus/70% and property
                              1 [        .         .         .         .         :         .         .         .         .         1         .         .         .     ] 136
 1 pHmar4_P_2_X_F12  100.0%     atggctatttt---------------------------catcgaccccccgggggttgcgggggtattggcggtcgacgaaaatagtgaagtgaaaccaggctagaaataggctgtgtcccgggaatcgggcatg-    
 2 Hmar2_A_P_4_X_F12 100.0%     atggctatttt---------------------------catcgaccccccgggggttgcgggggtattggcggtcgacgaaaatagtgaagtgaaaccaggctagaaataggctgtgtcccgggaatcgggcatg-    
 3 Hmar2_A_P_3_X_F12  94.4%     ctaggtatttt---------------------------cgtcgacccccggggggttgcgggggtattggcggtcgacgaaaatagtgaagtgaaaccaggctagaaataggctgtgtcccggaaatcgggcatg-    
 4 pHmar4_P_3_X_F12   94.4%     ctaggtatttt---------------------------cgtcgacccccggggggttgcgggggtattggcggtcgacgaaaatagtgaagtgaaaccaggctagaaataggctgtgtcccggaaatcgggcatg-    
 5 Hmar2_A_P_2_X_F12  69.4%     cacgcctattt---------------------------catcgaccccccgggggttcagggggtattgacggtcgacgaaagtaccgctgtggaagcgcccgatagagtggctgtactgcccagatccggcatg-    
 6 pHmar3_P_2_X_F12   69.4%     cacgcctattt---------------------------catcgaccccccgggggttcagggggtattgacggtcgacgaaagtaccgctgtggaagcgcccgatagagtggctgtactgcccagatccggcatg-    
 7 Hmuk_A_P_1_X_F12   58.3%     gttcgcgtttc---------------------------catcgacccccggggggttcgaggggtatcgagggtcgacggaaacgatgaagtgcaaacggcaagtagcagtgtatacgtggtcaaatcgaccatg-    
 8 pHmuk_P_1_X_F12    58.3%     gttcgcgtttc---------------------------catcgacccccggggggttcgaggggtatcgagggtcgacggaaacgatgaagtgcaaacggcaagtagcagtgtatacgtggtcaaatcgaccatg-    
 9 Hmuk_A_G_12_X_F12  63.0%     aaccccacttc---------------------------catcgaccccccgggggttcgggggctatcgaaggtcgacggaaacgatgaagtgtgaacggcgaatagaggtgcatacgtggcctaatcggccatg-    
10 Hmuk_G_12_X_F12    63.0%     aaccccacttc---------------------------catcgaccccccgggggttcgggggctatcgaaggtcgacggaaacgatgaagtgtgaacggcgaatagaggtgcatacgtggcctaatcggccatg-    
11 pHvolA_P_1_X_F12   58.3%     agattcgtttc---------------------------cgtcga-ccctcggggggtacgggggaattgagggtcgacggaaacgttgatgtgagttcgctatgtacagccgtctacccccgtgaattcggacgg-    
12 Hvol_A_P_1_X_F12   58.3%     agattcgtttc---------------------------cgtcga-ccctcggggggtacgggggaattgagggtcgacggaaacgttgatgtgagttcgctatgtacagccgtctacccccgtgaattcggacgg-    
13 Hvol_A_G_2_X_F12   65.7%     cccgacgtttt---------------------------cgtcgaccccccgggggttgcgggtgaattgagggtcgacggaaacactcttttgaattcgggtgatacacatcattgtacccgtgaattcgggatg-    
14 Hvol_G_2_X_F12     65.7%     cccgacgtttt---------------------------cgtcgaccccccgggggttgcgggtgaattgagggtcgacggaaacactcttttgaattcgggtgatacacatcattgtacccgtgaattcgggatg-    
15 Npha1_A_P_1_X_F12  59.3%     gagaacccttc---------------------------cgtcgaccctccgggggtgtggctggtattgccggttgacggaaacaaccaagttcaagcacggtgtacaaccgcttacgtgccgctttccggcatg-    
16 pNpha1_P_1_X_F12   59.3%     gagaacccttc---------------------------cgtcgaccctccgggggtgtggctggtattgccggttgacggaaacaaccaagttcaagcacggtgtacaaccgcttacgtgccgctttccggcatg-    
17 Npha1_A_G_1_X_F12  52.8%     gagtggctttc---------------------------catcaaccccccaggggtatggggttgattgggggtcgatggaaatttctttgtatgaaccagacgtagagctgttgacacgcctctagcagggctg-    
18 Npha_G_1_X_F12     52.8%     gagtggctttc---------------------------catcaaccccccaggggtatggggttgattgggggtcgatggaaatttctttgtatgaaccagacgtagagctgttgacacgcctctagcagggctg-    
19 Hbor_A_G_3_X_F12   65.7%     ggctgtctctc---------------------------catcga-cccccgggggtagcgggggtattggaggccgacggaaactacttgtagtaactgtccatcatagagcctgtgtgcccccaatcgggcatg-    
20 Hbor_G_3_X_F12     65.7%     ggctgtctctc---------------------------catcga-cccccgggggtagcgggggtattggaggccgacggaaactacttgtagtaactgtccatcatagagcctgtgtgcccccaatcgggcatg-    
21 Harc_AG_4_X_F12    55.0%     ttcttgtagctga-------------------------tgtcga-cccccgggggtactggggtgattgcgggtcgacggaaactacttgtgcaagacggccattttactgtctgtgtgcccaaaatcgggcac--    
22 Harc_G_4_X_F12     55.0%     ttcttgtagctga-------------------------tgtcga-cccccgggggtactggggtgattgcgggtcgacggaaactacttgtgcaagacggccattttactgtctgtgtgcccaaaatcgggcac--    
23 pNmag1_P_1_X_F12   56.9%     gtgtggttttc---------------------------catcga-cccctggggggaacacgtgtattaggggtcgatggaaattactttgtgtgaacggtcgaatgagtgactcatagccgtatttccggcatgg    
24 Ngre_A_G_5_X_F12   59.3%     cagcttgtttc---------------------------catcga-cctctaggggaagacagactattggaggtcgacggaaatcaatttgtgtcagcggcgtatacgtagactcaacgccggatttccggcatg-    
25 Hhis2_G_1_X_F12    58.3%     tagtcggtttc---------------------------cgtcgaccccccggggggaagcaccttattgatggtcgacggaaggtctttactgtgacccgccgttagcagccttatggcccgtatatcgggcatg-    
26 Htia_A_G_3_X_F12   50.9%     tatagcgcagt---------------------------catcga-ccccccgtgtgtagcgggctattgacggtcgacgaaaacactaacacctcttgtcgtataatacgccctatatggcccgatctggccatg-    
27 Huta_A_G_1_X_F12   59.3%     tatagtgtcgt---------------------------catcga-ccccccgggtttcgtgggctattgacggtcgacgaaaacactaactcccaggcagtggtatcacgtgctatatggccggtttcggccatg-    
28 Huta_G_1_X_F12     59.3%     tatagtgtcgt---------------------------catcga-ccccccgggtttcgtgggctattgacggtcgacgaaaacactaactcccaggcagtggtatcacgtgctatatggccggtttcggccatg-    
29 Hmar2_A_P_1_X_F12  23.7%     gagatgctctcaaacacgctgttcaagcaacgctgtgaaatcaacaatgtgctacggatgagcgtactgtgaaatactggatggacaaatatg-------------------------------------------    
30 Hhis_A_G_2_X_F12   18.9%     gagctgtcttctgatacactgctc--------------aaccggacagtctacggcgacgatccaactgaggatcagcgg--------------------------------------------tttctatagtcg    
   consensus/90%                sssssssssss...........................suTCGA.CCssssGGGssssssussssATsGssGGTCGAsGuAAussssssssssssssssssssssssssssssssssssssssssssssusssss.    

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