Reference sequence (1): Tsp_A_G_6_X_F3
Identities normalised by aligned length.
Colored by: consensus/70% and property
                            1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .     ] 416
 1 Tsp_A_G_6_X_F3  100.0%     ------------------------------------------------------ttccatcgtgatacgaggta-----------------------------------------------------------------ggaagaaagggttcccctaaaaatctctgtagaaatgttttccaagggaa------actatagcgt-----------------tttaagggaagaagactttttgtaaaataaagtcttccctaacttctcttctcgatctatatcatttataagtcacaattg-gaaaactaaaacaaga-taatgtgttctatggaaaactttgacataaatacactttcacacaacagagaaacaaataaataacaccaatacaaaataatccccaaggaaacg    
 2 Tsp_A_G_7_X_F3   88.2%     ------------------------------------------------------ttacatcgtgatacacggtg-----------------------------------------------------------------ggaggaaatggttcccctaaaaatctctgtagaaacgttttccacgggaa------aagtttgcag-----------------attaggggaagaagacatttctgaaaatacattcttccctgacccctcttcttgatctatatcatttataagtcacaattg-gaaaactaaaacaaga-taatgtgttccatggaaaactttgacataaatacactttcacaccacagagaaacaaataaataacaccaatacaaaataaatcccaaggaaagt    
 3 Tsp_A_G_1_X_F3   82.4%     ------------------------------------------------------ttctgtcgtgatacggggtg-----------------------------------------------------------------ggaggaaatgtttcccctagaaatctctgtagaaacgatttccacgggaa------aagttaatag-----------------cctacgggaagaagccatttctgaaaatacattcttccctggcctctcttcccgatccatatcatttataactcacaattg-gaaaactaaaacaaagctaatatattccatggaaaactttgacataaaaacactttcacacaacacacaaacaaataaataacacccaaacaaaataaaccccaaagaaaca    
 4 Tsp_A_G_14_X_F3  81.0%     ------------------------------------------------------ttccatcgtgatacggggtg-----------------------------------------------------------------ggaggaaagggttcccctaaaaatctctgtagaaatgttttccacgggaa------gctttaacgc-----------------tttacgggaagaagcctttttgtaaaatacattcttccctagaccctcttcccgatccatatcatttacatgcaacaacgaggaaaaataaaacaaaattaatgtacttaacgagaaacacttacacaaaaacactttcacacaacaccaaaacaaataaataacacc-caacaaaataaaccactgggaaaca    
 5 Tsp_A_G_12_X_F3  79.2%     ------------------------------------------------------ctccattgtgatacgggttg-----------------------------------------------------------------ggaggaaatggttcccctggaaatctctgtagaaacgttttccacgggaa------actttaacgc-----------------tttacgggaagaagcctttttgtaaaatacactcttccctagaccctcttcccgttccatatcatttacatgcaacaacgaggaaaaataaaacaaaattaatgtacttaacgagaaacacttacacaaaaacactttcacccaacaccaaaacaaataaataacaccccaacaaaataaaccccaaggaaaca    
 6 Tsp_A_G_5_X_F3   77.3%     ------------------------------------------------------ttccatcgtgatacggggtg-----------------------------------------------------------------ggaggaaatagttcccttagaaatctctgtagaatcgttttctacgggaa------actttaacgc-----------------tttacgggaagaagactttttgtaaaataagttcttccctagaccctcttcccattccatatcatttacagtcaacaatga-agaaactaaagaaaaattaatacttccaatgggaagaccctgcacaaaaacactttcacacaaaaccaaaacaaataaataacaccacaacaaaataaaccccaaagaaaca    
 7 Tsp_A_G_3_X_F3   76.9%     ------------------------------------------------------ccccaccgtgatacggggtg-----------------------------------------------------------------ggaggaaagggttcccttggaaatctctgtagaaatgttttccacgggaa------gctttaacgc-----------------tttacgggaagaagcatctttgtaaaatacattcctccctggtccctcttcccagttcatatcatttaccatgcacaatga-gaaaactaaagaaatcctacaatgataaatgggaaacacttgcacaaaaacactttcacacaacagagaaacaaataaataacaccccaacaaaataaaccactgggaaaca    
 8 Pcal_A_G_2_X_F3  21.1%     tgtgcgctgatttaagttacggcaatccccttaagcctttactcctcttccccttttgcccatagcctccaatgcgcgcacatatcctgcgctac-----------------------tagccgatccgcctctcgcgcgaagaatgacgcgcttttcacggcatctacgatagtggcgtcgagaagaatggcgggccacaacgcgggactgcgggcatatgtgtatgtaaagcgggggctgaaagcgacgcactgttccc-----------------------------acactcacaaggg-aaaaacttaaaaaac-------------------------------------------cacaagagccgaggacgtgagcg-------------------------------    
 9 Pcal_A_G_3_X_F3  20.3%     gg-----------------------tcttggtcaagagcaaatacgacatacaacacagcggcaaacgccgatgtgcacactttctgcggacaaccctccttgacagacatacaaacgtgacactgcgattgtgaccgcgaagaatggcgcgcttacaacgacgtctgcgtaagtggcactgtgaagaatggcgtctcacaacgcgggacaacggacgtacgtgtatgtaaagagggggttgaaaaggacgcgccgacccc-----------------------------acaaaaacgaggg-aaaaacttaaaaaac-------------------------------------------cacaagagccgaggacatgagcg-------------------------------    
10 Pcal_A_G_1_X_F3  21.8%     cc-----------------------tcaactcccgaaacataccccccagaacgcccaactataaaaccgtttgtatatgtatatgtcaaa--------ctttacaaacatacaaaaatgtgccaacggc--------ggaagaatggcgcgcttacaacggcgtccgtctaagaggcccccagaagaatggcgtacgacaacgggggcaaacggatatgtgtgtatgtaaagagggggtcaaaagcgacgtgccgttccc-----------------------------acaaaaacgaggg-aaaaacttataaact-------------------------------------------cacaagagccgcaaacgtgagcg-------------------------------    
   consensus/90%              ......................................................ssssussuTuAsssssusTG.................................................................GuAGuAsussGssCssssuusuussTCTGsusAAusGssssCsAsuuGAA......ussssAuCus.................ssTAsGsuAAGAuGssssTssssusuAsusussssTCCC.............................ssssssACuAssu.uAAAAsTsAAusAAs...........................................CACAAsAsssuAusAsuTuAusu...............................    

MView 1.60.1, Copyright © 1997-2015 Nigel P. Brown