Reference sequence (1): Moki_A_G_10_X_F4 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 ] 405 1 Moki_A_G_10_X_F4 100.0% aatttaagga------------------------------gaagttcagaaagtgaaatgacagatagtttattacaaacattgcaggaagtgt-------------------------cttcaaattctactgtacaaaagggag------taatatattttatacttggaattattgccattgtaa------------taatttactcattggctgaaaaaattatcatagtcatgttactaatcttgacaatatatgcactcatcaaatacttgcaagat--gaaagttc------aagaacttcaaaacggaa-----------------------------aagataatttcatttttgaccgtctccattttaccatggatatattgcaaatgggattg 2 Moki_G_10_X_F4 100.0% aatttaagga------------------------------gaagttcagaaagtgaaatgacagatagtttattacaaacattgcaggaagtgt-------------------------cttcaaattctactgtacaaaagggag------taatatattttatacttggaattattgccattgtaa------------taatttactcattggctgaaaaaattatcatagtcatgttactaatcttgacaatatatgcactcatcaaatacttgcaagat--gaaagttc------aagaacttcaaaacggaa-----------------------------aagataatttcatttttgaccgtctccattttaccatggatatattgcaaatgggattg 3 Moki_G_7_X_F4 35.7% ttttttagtataa----------------------ttaatatatttaaataaacaaaattatagaga-tttttaggagattttttatatattatgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatataaatttaatatcgtttatattcctaaatatctataaatca-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatataggag----taatgcaaag------------------ctattttatgtaaaataagaaaaattttaaact------------------------------------- 4 Moki_A_G_7_X_F4 35.7% ttttttagtataa----------------------ttaatatatttaaataaacaaaattatagaga-tttttaggagattttttatatattatgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatataaatttaatatcgtttatattcctaaatatctataaatca-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatataggag----taatgcaaag------------------ctattttatgtaaaataagaaaaattttaaact------------------------------------- 5 Moki_G_8_X_F4 37.6% ttttttagtataa----------------------ttaatatatttaaataaatagaattatagaga-tttttaagagattttttatatattgtgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaatttttgaact------------------------------------- 6 Moki_A_G_8_X_F4 37.6% ttttttagtataa----------------------ttaatatatttaaataaatagaattatagaga-tttttaagagattttttatatattgtgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaatttttgaact------------------------------------- 7 Moki_A_G_9_X_F4 36.9% atttttagtataa----------------------ttaatatatttatataaatagaattatagaga-tttttaagagattttttatatattgtgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagattcgaaaagtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaaattttgaactg------------------------------------ 8 Moki_G_9_X_F4 36.9% atttttagtataa----------------------ttaatatatttatataaatagaattatagaga-tttttaagagattttttatatattgtgttatttttaatccttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagattcgaaaagtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaaattttgaactg------------------------------------ 9 Moki_G_1_X_F4 38.2% atttttagtataa----------------------ttaatatatttatataaataaaattatagaga-tttttaagagattttttatatattatgttgttttcatctgttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatatctccaaatca-------------tccgtcgtaaatcaccaccaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatatagggg----taatgcaaag------------------gtattttatagaaaataagaaaatttttgaact------------------------------------- 10 Moki_A_G_1_X_F4 38.2% atttttagtataa----------------------ttaatatatttatataaataaaattatagaga-tttttaagagattttttatatattatgttgttttcatctgttccttgtaaatt-----ttttagattttaaaaaaatatcaatttaatatcttttatattcctaaatatctccaaatca-------------tccgtcgtaaatcaccaccaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagat--gcaaggtttatatagggg----taatgcaaag------------------gtattttatagaaaataagaaaatttttgaact------------------------------------- 11 Moki_A_G_3_X_F4 36.7% ttttttagtataa----------------------ttaatatatttatataaataaaattatagagattttttaagagatttcttatatattatattatttttatctgttccttgtaaatt-----ttttatattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagattcgaaaagtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaatttttgaact------------------------------------- 12 Moki_G_3_X_F4 36.7% ttttttagtataa----------------------ttaatatatttatataaataaaattatagagattttttaagagatttcttatatattatattatttttatctgttccttgtaaatt-----ttttatattttaaaaaaatatcaatttaatatcttttatattcctaaatacctttaaatta-------------tccgtcgtaaatcacccttaaaac-tatataaataacaaaa------------------------atcaatgtgattcgagattcgaaaagtttatatagggg----taatgcaaag------------------gtattttacataaaataagaaaatttttgaact------------------------------------- 13 Moki_G_2_X_F4 36.3% ttttttagtataa----------------------ttaatatatttaaataaatagaattatagaga-tttttaggagatttcttatatattatattatttttatctgttccttgtagatt-----ttttagattttaaaaaaatatcaatttaatatcatttatattcctaaatacctttaaatta-------------tctgtcgtaaatcacccttaaaacttatataaataacaaaa------------------------atcaatgagattcgagat--gcaaggtttatatcggag----taatgcaaag------------------ttattttatgcaaaataagaaaaattttgaact------------------------------------- 14 Moki_A_G_2_X_F4 36.3% ttttttagtataa----------------------ttaatatatttaaataaatagaattatagaga-tttttaggagatttcttatatattatattatttttatctgttccttgtagatt-----ttttagattttaaaaaaatatcaatttaatatcatttatattcctaaatacctttaaatta-------------tctgtcgtaaatcacccttaaaacttatataaataacaaaa------------------------atcaatgagattcgagat--gcaaggtttatatcggag----taatgcaaag------------------ttattttatgcaaaataagaaaaattttgaact------------------------------------- 15 Moki_G_4_X_F4 35.6% aattctggaa----------------------------ctatatttctattaacccataggtggaaggttaaaatcagaccattgatggatggaaattttttgcttggaatttcataaactaatggttttgctcgttaaaa-----------tcagaccattgatggatggaaatgtggtaagttta----------------tcaatgtattttttagaagaaatgttatgctcgttaaa------------------------atcagaccattgatggat--ggaaattttaccctgatgcttccagtgcggggagctcattatttccttttgtattttacataaaataagaaaatttttgaact------------------------------------- 16 Moki_A_G_4_X_F4 35.6% aattctggaa----------------------------ctatatttctattaacccataggtggaaggttaaaatcagaccattgatggatggaaattttttgcttggaatttcataaactaatggttttgctcgttaaaa-----------tcagaccattgatggatggaaatgtggtaagttta----------------tcaatgtattttttagaagaaatgttatgctcgttaaa------------------------atcagaccattgatggat--ggaaattttaccctgatgcttccagtgcggggagctcattatttccttttgtattttacataaaataagaaaatttttgaact------------------------------------- 17 Msed_G_5_X_F2 21.2% atggctgggatcagggagaagctcaactcccttgtctcgtctactccggttagccggacggtaac-------------------------------------------------------------cttgattgccccgagcggatcggggaagacgctgtccggcgttctaactgcactcaagatggggaagtcgaggttgatctatgctcttccctacattagtatt------------------------------------gttgagcaggttcacgac-----------------gtgctctcaaggacgaggatggacccgctcaagttctatcatctatactagggtaaggttttttagggctggctatcaataacaaataagagcggt--------- 18 Msed1_A_G_5_X_F2 21.3% atggctgggatcagggagaagctcaactcccttgtctcgtctactccggttagccggacggtaac-------------------------------------------------------------cttgattgccccgagcggatcggggaagacgctgtccggcgttctaactgcactcaagatggggaagtcgaggttgatctatgctcttccctacattagtatt------------------------------------gttgagcaggttcacgac-----------------gtgctctcaaggacgaggatggacccgctcaagttctatcatctatactagggtaaggttttttagggctggctatcaataacaaataagagcg----------- consensus/90% ssssssuGsA..............................ssAsTsssussAusssusssusuus.............................................................sTssusssssssuAu...........ssAsusssTssusssssssAAsTusssssAssssu................sssusssssssssssssAsss.TuTs....................................uTsuusssssTssssGAs.................usu....sAusussuuu.............................AssAsuussssusTTTTsAsss..................................... |
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