Reference sequence (1): Tpha1_A_G_11_X_F2 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . ] 216 1 Tpha1_A_G_11_X_F2 100.0% cttaagctcgcattccggcctgt----------------catcctcgcttcgcctgtcctgttacccggccttccataggtcgctcgccggcagaccccgggtattttcattctctgatggtgccgccgctggcggcatggtggtctatgaggaattgaaaccaggtcaaaaacctcctgcctggggttgaagcggtcc----------------- 2 Tpse_A_G_6_X_F2 45.2% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacagaagaatattgacagtttaactgctcaaaagatagc----------------- 3 Tbro_C_G_4_X_F2 44.2% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacaggtcaaacctggggcaaagacttacgacgggaaa------------------- 4 Tpse_A_G_4_X_F2 44.2% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacaggtcaaacctggggcaaagacttacgacgggaaa------------------- 5 Tpse_A_G_7_X_F2 46.2% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaaccctatcagctccggtggcaccccaaacgcaatagc------------------- 6 Tbro_C_G_5_X_F2 46.2% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaaccctatcagctccggtggcaccccaaacgcaatagc------------------- 7 Tpse_A_G_3_X_F2 45.3% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacctaatttgctttaagcttgttgctacaagatagaccttg--------------- 8 Tbro_C_G_3_X_F2 45.3% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacctaatttgctttaagcttgttgctacaagatagaccttg--------------- 9 Tita_A_G_4_X_F2 46.0% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctatgaggaattgaaactaaataaaccgagactcaaaaatcggctcaatgatg------------------ 10 THER1_G_3_X_F2 47.0% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactaaacttgaaaaatgcagcttttttcaagtttggtt------------------ 11 THER75_G_3_X_F2 47.0% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactaaacttgaaaaatgcagcttttttcaagtttggtt------------------ 12 THER75_G_2_X_F2 46.0% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactttttttatctccccgcatcggctgcgggttagttttc---------------- 13 THER1_G_2_X_F2 46.0% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgctg-catttgcggcatgggagtctataaggaattgaaactttttttatctccccgcatcggctgcgggttagttttc---------------- 14 Tpse_A_G_5_X_F2 39.4% ct--gtctatgagtcgggctcaaagcaccaaggtaagaacgacctttcttcaccagccgctgtactgattatatcat---------------caaaaaaggacattttcatcctctgctggtgccg-catttgcggcatgggagtctataaggaattgaaacgttttttgt------------------acatttcactatcaaggatttttctat 15 Tcom1_A_G_11_X_F2 38.1% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacacgaaatgc------------------cgaagatcacatacatggccaaactga 16 Tcom1_A_G_7_X_F2 40.8% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacac--------------ttccaccgccgagaacatgacatagatcgtcccg---- 17 Tcom1_A_G_10_X_F2 44.7% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaaccctgtt--ttcaggcttctataattcacaaccacctca---------------- 18 Tcom1_A_G_5_X_F2 47.2% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacccggtatattccggcgtccttgaacc-cgagcactata---------------- 19 Tcom1_A_G_8_X_F2 41.2% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacaa------------tgcttcgcaggatcaggaactgaatatacgatacag---- 20 Tcom1_A_G_6_X_F2 45.6% cc--gtctaagagtcgggctcgcagcaccaaga-aacaacgacctccctccaccagccgcag----gaatattgtac---------------cgcattcgtccattttcatcatctgctggtgccg-cattagcggcatgggggtctatgaggaattgaaacaaagtcggctggcgcgcctc-------gaggcgctgcaggagt----------- 21 Ktus_0C_G_3_X_F2 30.2% ---------------------------atgtggatggggaagcccaccacctccacccctatgagcagctgtctcatagg------gatggataaaagagccggctctggaagttctccagcgctg-ctccagcagt-tccggacctactggaaattcaacgaagaagaccttctactactatcatacgaggaggacagtgacatgaaagacctgt consensus/90% Cs..GTCTAsGAGTCGGGCTCusAGCACCAAGu.AAsAACGACCTssCTsCACCAGCCGCsG....GAsTATsssAs...............CusAsssGssCATTTTCATCsTCTGCTGGTGCsG.CATTsGCGGCATGGGuGTCTATuAGGAATTGAAACssssss..s.......ssss.......sssssuss................... |
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