Reference sequence (1): Pisl_A_G_1_X_F16 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . ] 246 1 Pisl_A_G_1_X_F16 100.0% -t---------------------------------------agacagccaaacgcgaagaatggcgctgggtctccgccatctctaaggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccgtctctcagacagaggaatgtatgaatgta-aagaggggttggaaagcgaccg--ccggccagacaaaaaaccacgaaaaaacttaaaaacccaaaagatccaaaaacacaag----cc 2 Tneu_A_G_4_X_F16 88.9% -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccggagctcagacagaggaatatatgaatgta-aagggcggtggaaaagcgaccc--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc 3 Tneu_G_4_X_F16 88.9% -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgccggagctcagacagaggaatatatgaatgta-aagggcggtggaaaagcgaccc--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc 4 Tneu_A_G_2_X_F16 90.5% -t---------------------------------------agaaggccaaacgcgaagaatggcgctgggtggccgccttctctagggcgcgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctaaaaacacaag----cc 5 Tneu_A_G_3_X_F16 87.0% ac---------------------------------------agaaacgcacacgcgaagaatggcgctgggttg-cgccttctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc 6 Tneu_G_3_X_F16 87.0% ac---------------------------------------agaaacgcacacgcgaagaatggcgctgggttg-cgccttctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgtacgcctacacccagacaggagaatgtgtgaatgta-aagaggggctggaaagcgaccg--ccgaaccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatctgaaaatacaag----cc 7 Pisl_A_G_3_X_F16 87.0% ct---------------------------------------agacagccaaacgcgaagaatggcgctgggtta-cgcagtctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgcacgccggaacccagacaggagaatgtgtgaatgta-aaggggcgtttgaaagcgaccc--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccatagacacaag----cc 8 Pisl_G_3_X_F16 87.0% ct---------------------------------------agacagccaaacgcgaagaatggcgctgggtta-cgcagtctctaaggcgtgtgtatgatggtaaaggcgaagaatggcgcacgccggaacccagacaggagaatgtgtgaatgta-aaggggcgtttgaaagcgaccc--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccatagacacaag----cc 9 Tneu_A_G_7_X_F16 86.5% tt---------------------------------------agaaagccgaaggcgaagaatggcgctgggtcg-cgccctctatgaggcggagttatgatggtagaggcgaagaatggcgcacgccgtctctcagacagaggaatgtgtgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc 10 Tneu_G_7_X_F16 86.5% tt---------------------------------------agaaagccgaaggcgaagaatggcgctgggtcg-cgccctctatgaggcggagttatgatggtagaggcgaagaatggcgcacgccgtctctcagacagaggaatgtgtgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc 11 Pisl_A_G_5_X_F16 85.5% ct---------------------------------------tgacagtcaaacgcgaagaacggcgctgggtca-cgccgtctctgaggcgttgtcacgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtatgaatgta-aagggcggtggaaaagcgaccg--ccgagggaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc 12 Pisl_G_2_X_F16 79.0% tt---------------------------------------gtgagggtagaggcgaagaacggcgctgggttc-tcccttcggctaggcgtagttacgatcgtaaaggcgaagaacggcgcacgccgtctctcagacaggagaatatatgaatgta-aagggcggtggaaaagcgaccc--ccggacaaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccacacaaacaag----cc 13 Pisl_A_G_2_X_F16 79.0% tt---------------------------------------gtgagggtagaggcgaagaacggcgctgggttc-tcccttcggctaggcgtagttacgatcgtaaaggcgaagaacggcgcacgccgtctctcagacaggagaatatatgaatgta-aagggcggtggaaaagcgaccc--ccggacaaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccacacaaacaag----cc 14 Tneu_G_1_X_F16 79.5% ac---------------------------------------ttaggataacaggcgaagaacggcgctgggttc-ttccttcggctaggcgtagttatgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtgtgaatgta-aagggcggtgggaaagcgaccc--ccgagccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc 15 Tneu_A_G_1_X_F16 79.5% ac---------------------------------------ttaggataacaggcgaagaacggcgctgggttc-ttccttcggctaggcgtagttatgatcgtaaaggcgaagaatggcgcacgccgtctctcagacaggagaatgtgtgaatgta-aagggcggtgggaaagcgaccc--ccgagccaacaaaaaaccacgaaaaaacttaaaaacccaaaagatccgaaaatacaag----cc 16 Pys_0B_G_9_X_F16 64.0% at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggttt-gggcgtctcttaagcatccagcccgccgccactgcgaagaatggcgtgcg-gctaaatcacacagcggaatatatgaatgta-aggcgctacccaaaagcgtcca--ccgaagagacaaaaaacagacgaaaaacttaaaaacacacaaaaaccgcaaaaaccag----cc 17 P186_G_9_X_F16 64.0% at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggttt-gggcgtctcttaagcatccagcccgccgccactgcgaagaatggcgtgcg-gctaaatcacacagcggaatatatgaatgta-aggcgctacccaaaagcgtcca--ccgaagagacaaaaaacagacgaaaaacttaaaaacacacaaaaaccgcaaaaaccag----cc 18 Pys_0B_G_3_X_F16 62.5% aa---------------------------------------ccgcccggcgtggcgaagaatggcgttgggtct-cggcgtctcttaaacattcggcccgccgccactgcgaagaatggcgcacg-gccaggccgaacagcggaatatatgaatgta-aaacgcggcaaaacagcgtcca--ccgaagagacaaaaagcagacgaaaaacttaaaaacccacaaaaaccatcaaaaccag-----c 19 P186_G_3_X_F16 62.5% aa---------------------------------------ccgcccggcgtggcgaagaatggcgttgggtct-cggcgtctcttaaacattcggcccgccgccactgcgaagaatggcgcacg-gccaggccgaacagcggaatatatgaatgta-aaacgcggcaaaacagcgtcca--ccgaagagacaaaaagcagacgaaaaacttaaaaacccacaaaaaccatcaaaaccag-----c 20 Pys_0B_G_2_X_F16 63.5% tt---------------------------------------gtgcacggcgcggcgaagaatggcgttgggcct-cggcgttttctcaacctccacgttgctgtgcttgcgaagaatggcggccg-cccaccccgaaaagagacatatatgaatgta-aaacgcggcagaaaagcgtcca--ccgaagatacaaaaaacctacaaaaaacttaaaaacccacaaaaaccaacaaaaccag----cc 21 Pys_0B_G_1_X_F16 61.5% at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggtct-cggctttctctacacctctggcccgccgcctctgcgaagaatggcgatcg-gcaagcctgaaaagagacatgtatgaatgta-aagcgtggcggaaaagcgtcca--ccgaagaagcaaaaaacagacgaaaaacttaaaaacccacaaaaacaatcaaaaccag----cc 22 P186_G_1_X_F16 61.5% at---------------------------------------gtgcacggcgcggcgaagaacggcgctgggtct-cggctttctctacacctctggcccgccgcctctgcgaagaatggcgatcg-gcaagcctgaaaagagacatgtatgaatgta-aagcgtggcggaaaagcgtcca--ccgaagaagcaaaaaacagacgaaaaacttaaaaacccacaaaaacaatcaaaaccag----cc 23 Paer2_A_G_2_X_F16 59.0% ct---------------------------------------tctgtcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc 24 Paer_G_2_X_F16 59.0% ct---------------------------------------tctgtcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc 25 Paer2_A_G_1_X_F16 58.5% tc---------------------------------------ctcttcgccgcggcgaagaacggcgttgggtgt-ttacgactatttccgcttgtcattctcttctaagcgaagaacggcgcatt-cttcccccggtcggcggtatatatgaatgta-aagcgagtgtgaaaaggagcta--gccgtacagcaaaaaatcaaagaaaaacttaaaaacccacaggaactatacacgcaag----cc 26 Paer2_A_G_7_X_F16 62.5% gg---------------------------------------cgagatagtgcggcgaaaaacggcgttggatat-gcgccgtttctgccctctgccgttatcatcacggcgaaaaatgacatacg-ccgtcggcggacagggaaatatatgaatgta-aagtgagtgtgaaaaggcgctt--gccgcaagacaaaaaaccaaagaaaaacttaaaaacccaaaagaactttaaacgcaag----cc 27 Pogu_0TE_G_2_X_F16 61.5% cc---------------------------------------ctacccctcgcggcgaagaacggcgttgggtat-cgacgggttttgcggcttcgccttgcagacgccgcgaagaatggcgtgtg-ctgtcggcatacggcgatatatatgaatgta-aagcggggagagaaagaagccc--gccgagagacaaaaaaccaaagaaaaacgtaaaaaaccaaaagaactgtacacacgag----cc 28 Tneu_A_G_10_M10_F3 40.4% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca 29 Tneu_G_10_M10_F3 40.4% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca 30 Tneu_A_G_9_M10_F3 40.4% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactacgggacgcacaaggccagctctagaaaaaccaacaaccca-gaaa-gagctatcacaagaacaccccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaccaaaaaccaaaacccagaaggccca 31 Tneu_G_5_M10_F3 38.9% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggtcagctctagaaaaacaagcaaccca-gaaa-gagcagtctcaagaacaccccgaaatcaacacaaaaccccacagagaaaaacttaaaaaccaacaaaaaccaaaacccagaagaccca 32 Tneu_A_G_5_M10_F3 38.9% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggtcagctctagaaaaacaagcaaccca-gaaa-gagcagtctcaagaacaccccgaaatcaacacaaaaccccacagagaaaaacttaaaaaccaacaaaaaccaaaacccagaagaccca 33 Tneu_A_G_8_M10_F3 40.4% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggttagctctagaaaaaccaacaaccca-gaaa-gagcagtctcaagaacacgccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaacaaaaaccaaaacccagaaacccca 34 Tneu_G_8_M10_F3 40.4% ------------------------------------------taaaaaacggcgggcagaacaacggcgga----cggcgccgccgacctccagccacacg-ctttcaactgcgggacgcacggggttagctctagaaaaaccaacaaccca-gaaa-gagcagtctcaagaacacgccgaaatcaacacaaaacccaccagagaaaaacttaaaaaccaacaaaaaccaaaacccagaaacccca 35 Tten2_A_G_6_M10_F3 38.9% ------------------------------------------tataaatcgccgtgcagaacaacggcgga----cggcgtcgccgacagtcaaacacgcg-ccttcaactgcgggacgcagggggccagttctagagaaatcagcagtccg-ggga-gagctatctcaagaacacgctgcaatcaacgcaaaacccaccagagaaaaacttaaaaacagccaaaaaccaaaacccagaaggcccg 36 Tten2_A_G_7_M10_F3 37.9% ------------------------------------------taaaaaacggcggacagaagtacggcgga----cggcggcgccgacagtaaaacacgcg-ctttcaactgccggaggcagaaggccagctgtggaaaagagacaaccccacccct-tagccaacacgagaacacgccagaactaacacaaaacccaccagagaaaaacttaaaaacagccaaaagccaaaacccagaaggcccg 37 Tten_G_7_M10_F3 37.9% ------------------------------------------taaaaaacggcggacagaagtacggcgga----cggcggcgccgacagtaaaacacgcg-ctttcaactgccggaggcagaaggccagctgtggaaaagagacaaccccacccct-tagccaacacgagaacacgccagaactaacacaaaacccaccagagaaaaacttaaaaacagccaaaagccaaaacccagaaggcccg 38 Tten_G_5_M10_F3 30.5% ------------------------------------------tataaatcgccgtgcggaagcacggcgct----cggcgatgccgagggtcggacgcacg-ctttcaactgccggacgcaggac-ccaaccgtgtagaacaggcaaagccctcccc-ggggcaacacaaggtcgcgccgggaccaagacaaagacccgcagaggaaaacttaaaaatcggcagaaactaaagaccaggaggcccg 39 Tten2_A_G_5_M10_F3 30.5% ------------------------------------------tataaatcgccgtgcggaagcacggcgct----cggcgatgccgagggtcggacgcacg-ctttcaactgccggacgcaggac-ccaaccgtgtagaacaggcaaagccctcccc-ggggcaacacaaggtcgcgccgggaccaagacaaagacccgcagaggaaaacttaaaaatcggcagaaactaaagaccaggaggcccg 40 Tten2_A_G_4_M10_F3 33.0% ------------------------------------------taaaaaacggcggacagaagtacggcgtt----cggcggcgccgacctccagccgcacg-ctttcaactgccggaggcgggat-ccgaccgcgtagaacagacaaagccctcccc-ggggcaacacaaggtcgcgccgggactaacacaaagacccacagaggaaaacttaaaaatcggcaaaaactaaagaccagaaggcccg 41 Pogu_0TE_G_5_M10_F3 36.9% ------------------------------------------tataaaacgccgtgcaagacaaagccgca----agacgccgccgaggaggaaaaacacg-cactcaactctcaga-acaagactaaaaccccagacccacacacaacacacaaga-aaacaaccacaacaacacgccaaacccagccaaaaacccacccaagaaaaacttaaaaacccacaaaaacaaaaacccagaaacccca 42 Pars_G_3_M10_F3 36.9% ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca 43 Pars_G_2_M10_F3 36.9% ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca 44 Pars_A_G_2_M10_F3 36.9% ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca 45 Pars_A_G_3_M10_F3 36.9% ------------------------------------------tataaaacgccgtgcaggacaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaacaagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca 46 Pogu_0TE_G_4_M10_F3 36.5% ------------------------------------------tataaaacgccgtgcaggtcaaagccgca----agacgccgccggagggcaaaaacacg-cccaaagccacccgccacaacacaccgacgccgaacccagaataagacacaaa---aaacaaacccaaagacaagccagtccgaaaccaaaacacacccaagaaaaacttaaaaacccaccaaaacaaacccccagaaacccca 47 Paer_G_3_M10_F3 36.5% ------------------------------------------tataaatcgtcgtacaacaactcggcgca----ccccggcgccgagaggcaaaaaacgg-cattcaactaccgggaatagagt-caatctccagaataacagccacaaaccccta-aaaacgacacaagaaaaaaccgcctccaaagacaaaacaaaaggagaaaaacttaaaaacccccaaaaacacaaatccagagatccca 48 Paer2_A_G_3_M10_F3 36.5% ------------------------------------------tataaatcgtcgtacaacaactcggcgca----ccccggcgccgagaggcaaaaaacgg-cattcaactaccgggaatagagt-caatctccagaataacagccacaaaccccta-aaaacgacacaagaaaaaaccgcctccaaagacaaaacaaaaggagaaaaacttaaaaacccccaaaaacacaaatccagagatccca 49 Pars_A_G_6_M10_F3 40.4% ------------------------------------------tataaaacgtcgtgcagaaatacggtgcc----cggcggcgccgaggggttaaacacgg-cattcaactcccagctccacagc-caaactgccggcaaagaacaaaactgctcta-aaaccaccacgagggaaaaccgctcccaaaacaaaaccaaaagaaaaaaaacttaaaaacccacaaaaacaaaacaccagaaccccca 50 Pcal_A_G_4_M10_F3 36.8% ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgaaaatcaaaaacgca-ccttcaactatgccacaattgaaagaggcggcaaacaaaccactatactaataatagatcaagacatcaatggccccgtacgactcccagaaatcgccaaagaaaaacttaaaaactgccagaaacaaaaacccaggaagccca 51 Pcal_A_G_6_M10_F3 35.3% ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgagagttgaagatacg-ccttcaactattccacagttgaaagaggtggcagacaagccgtaagggatcaattctagtaaactcaaaagcacgccgcacaccctctaaaagacaccaaagaaaaacttaaaaactaacaaaaacaaatgcccaagaaaccca 52 Pcal_G_6_M10_F3 35.3% ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgagagttgaagatacg-ccttcaactattccacagttgaaagaggtggcagacaagccgtaagggatcaattctagtaaactcaaaagcacgccgcacaccctctaaaagacaccaaagaaaaacttaaaaactaacaaaaacaaatgcccaagaaaccca 53 Pcal_A_G_5_M10_F3 35.5% ------------------------------------------taaaaaacgtcgtgcaggagaaaagcgta----caccggcgccgaggtgcaaaaacacg-ccatcaactatgccacagttgaaagaagtagcgtacaagccgtaaggctccaatt-aaacaagctcaaaaacacgtcacacgctctctgaaatacaccaaagaaaaacttaaaaaccgccagaaacaaaaacccaggaagccca 54 P186_G_5_M10_F3 34.5% ------------------------------------------tataaaacgtcgtgcagacccacagcgaa----cggcgccgccgagctgttgccacacgacattcaactaccagaagccgctaggcacgctgacacaatgtagaaagacaaca---aaacacaagcaacaacaacacagcaatcactccaatactacacaagaaaaacttaaaaacccacaaaaaaccatgaccaggaacccca 55 Pys_0B_G_5_M10_F3 34.5% ------------------------------------------tataaaacgtcgtgcagacccacagcgaa----cggcgccgccgagctgttgccacacgacattcaactaccagaagccgctaggcacgctgacacaatgtagaaagacaaca---aaacacaagcaacaacaacacagcaatcactccaatactacacaagaaaaacttaaaaacccacaaaaaaccatgaccaggaacccca 56 Pcal_A_G_7_M10_F3 23.4% ccaatgagctcgcccaccctcctcacgtctgccttggccagctttacgatgtcgttccagagggccttgtacctacccctacgtcgccaatgaggcaaagg---------------------------------------------------------aagtgatcacgagaagtctctacatcgctccacaaaacagctaaagaaaaacttaaaaacaaccaaaaacgatacctaagaaaca-ta consensus/90% ..........................................sussssssussGsusAGuAssusussGsu....sssCsssssssussssssssssssss.ssssssuCsusssussussssss.ssssssssusAsssssssssusssss.ss...uAusssssssuuuuussssCss..ssssssssusAAsssusssssuAAAAACTTAAAAACssssAuuAsCsussssssssuu....Cs |
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