Reference sequence (1): Kpne_C_G_4_M7_F1 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 . . . . : ] 453 1 Kpne_C_G_4_M7_F1 100.0% atgatctgccgcca-----------------gcggtgcgtggacgaatg-------------------------------------------------------------------------aagctgtggtttgtcgaaccacg----------gccaaatgtttttgtctcaggcgtcaaagattcggtcgcgcaaaccgt----------------------------tgttgattacctgttgcagtacacgcctgtggaatcaggcctgatgctgtttcgcagtattcctcaaccgcctggttatgaaattcgctacaagggtgaggtcagaaagccgattattgatctcagtgggttacagctgattattgaaa---ccctaaaactgtcgtaatacgtggatattgtggttaaactctcgctctttcaca------atatgttggt 2 Vcho_A_G_1_M7_F1 71.2% atgatttacccccg-----------------gcagtcagagggcgtatg-------------------------------------------------------------------------aagctatggtttgttgaacccag----------agccaatgtgtttgtttctggcgtaaaagattccgttgcagtgacggt----------------------------tgtcgactacttaatgcagcattgcccagcagaatcgggcttgatgttatttcgcagtattccagatccccctggttatgagattcgttacaaaggtgaagtgcgcaaacccgtgattcagctctctggattacagttgattgtcgaaa---cccttattttgtcaaaatagcaatata-tgggtttattactgtgctctttaaca------atatattggt 3 Paes_A_G_1_M7_F1 55.7% atgatattccgcct-----------------gcagtaagggggcgaatg-------------------------------------------------------------------------aaactctggtttgtggagccgcg----------agcaaatgtttttgtttctggaataaaagattctgttgctaaaaaagt----------------------------aatagactatttgcataagcactgtccgtctgaatccggacttatggtgttcaaaagttgcaatgaagcaccaggatatgagattttcggccatggtgatactcgtaagcagttgattgaactttcaggaatgcaactcgttattgagaagtattctgaacc-------caatcgagaatcaaaaacatgatcgggcggctgaaagccctgtaaattccagt 4 Ctep_A_G_4_M7_F1 52.0% atgatctgcccccg-----------------gccgtgcgtggccggatg-------------------------------------------------------------------------aagctctggttcatcgaaccacg----------ggcgaacgttttcgtctctggtgtgcgggacagcctggccagaaaggt----------------------------ggtggattatctgcaccagcactgcccgccgaaaagcggcctgatgattttcaacagctcgaacacgtgccccggctacgaaattttcggtttgggcgacacgcgcaaagagatcacggaaatatcgggcctgccgctcgtgatcgaaaaatccgccgcctcgccaccagaaaaccaaaacagattgacgccagaggccccgaaagtccagtaaaacccagt 5 Dalk1_A_G_3_M1_F1 58.6% accacctgcctccg-----------------gccgtccggggccgcatg-------------------------------------------------------------------------aaactctggttcgtggagcccag----------gccaaacgttttcgtctccggcgtcaaagactccgtggcggacggagt----------------------------cgtgaaatacctgctggaccactgcccgccggaatccgggctcattctgttccagcgttccaataagccgccgggctacaaaatccgcgggctgggcgatcataccagagccctggtggaaatcagcggcctgcaattggtgcaggaaaaaaatggcctcttggcaaaatagcaagatgttgttactgggataacaaacgccgaca------agatgttggt 6 Kvar1_A_G_3_M7_F1 26.4% acgactttccgctgcgcgcctacggaacggcgctgcgcgatgccgaacactgccatctgacgctcccggcggaggatgtgtggatttttccgcagcggtaactacgcgaagccacggaaggcaagcatcagtacgtcgcgctacgttcagggtatgacaaaagcgttttgcgcctggctgcgaggcgggcaggccagtagggtatatcggtcctggtcagcagcaagtcgacggtggtgatatggggacatactttttcgtttgataaatgttgatgctgatgcgga---------------------------------------------------------------aaccctgcggagtgcaatta-------------tcgtaaatctggcgttttaatacgccgctaaacaca------------------------atatgctggt 7 Kpne_D_G_3_X_F1 26.0% atgactttccgctgcgcgcctacggaacggcgttgcgcgatgccgaacactgccatctgacgctcccggcggaggatgtgtggatttttccgcagcggtaactacgcgaagccacggaaggcaagcatcagtacgtcgcgctacgttctggggatgacaaaagcgttttgcgcctggctgcggggcgggcaggccagtagggtatatcggtcctggtcagcagcaagtcgacggtggtgatatggggacatactttttcgtttgataaatgttgatgctgatgcgga---------------------------------------------------------------aaccctgcggagtgcaatta-------------tcgtaaatctggcgttttaatacgccgctaaacaca------------------------atatgctgg- 8 Kpne_E_G_1_M7_F1 26.4% acgactttccgctgcgcgcctacggaacggcgctgcgcgatgccgaacactgccatctgacgctcccggcggaggatgtgtggatttttccgcagcggtaacttcgcgaagccacggaaggcaagcgccaggatgacgcgctacgttctggggatgacaaaagcgttttacccccggctgcgggccgggcaggccagtagggtagaccggtccaggtcagcagcaaatcgacggtggttatatggtgacatactttttcgtttgatgaatgttgatgctgatgcgga---------------------------------------------------------------aaccctgcggagtgcaattg-------------ttgtaaatctggcgttttaatacgccgctaaacaca------------------------atatgctggt 9 Kpne_C_G_5_M1_F1 26.4% acgactttccgctgcgcgcctacggaacggcgctgcgcgatgccgaacactgccatctgacgctcccggcggaggatgtgtggatttttccgcagcggtaacttcgcgaagccacggaaggcaagcgccaggatgacgcgctacgttctggggatgacaaaagcgttttacccccggctgcgggccgggcaggccagtagggtagaccggtccaggtcagcagcaaatcgacggtggttatatggtgacatactttttcgtttgatgaatgttgatgctgatgcgga---------------------------------------------------------------aaccctgcggagtgcaattg-------------ttgtaaatctggcgttttaatacgccgctaaacaca------------------------atatgctggt consensus/90% AssAssTsCCsCss.................GssGsssGssGsCGsAsu.........................................................................AAuCsssuGsssussGsuCsssG..........usCsAAsGssTTsssssCssGssTssuuGssssssssGCssssussGT............................sussuussAssTusssssssAsssssssssssuAsssusssTsATssTssTssuss...............................................................AsssssssGGssTuCsusTs.............ssssssssss.......sAsssssssu.susssssu........................AsAssssuG. |
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