Reference sequence (1): Msil_A_G_2_M1_F1 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . ] 135 1 Msil_A_G_2_M1_F1 100.0% -------------------tcgggattgtgacacttccggggggtctagcggctagttttgctgttagaatcaaga----------------------------------------------------------- 2 Mrub2_A_G_3_M1_F1 93.0% -------------------tcgggattctgacacttccgggggatcgagcggctagttttgctgttagaatcaagt----------------------------------------------------------- 3 Trad_A_G_9_M1_F1 22.7% tcgaggcgagaaccatgacaacctagctgacacttccgaggggggcagcccgtagatttgccgtgctgggctagt------------------------------------------------------------ 4 Tthe_0JL_P_6_M1_F1 41.3% cagaaaaacctgcaat-ccttcccaaatagacacataaaggggggtgagcgggcatttttgccgtcctggtcatgt----------------------------------------------------------- 5 Tthe2_B_P_7_M1_F1 38.7% cagaaaaacctgcaat-ccttcctaaacagacacataaaggggggtaagcgggcgtttgtgccgtcctggtcatgt----------------------------------------------------------- 6 Tthe2_B_P_8_M1_F1 34.7% agccaaagtccgtaac-tgctcccgaatagacacataaacgggggtgagcgggcgttttcgccgtcctggtcatgt----------------------------------------------------------- 7 Ths_0CC_G_8_X_F1 36.5% caaggtttcccggagt-gcttccctaaaaaggacataaaggggggtgagctgggatttttgccgtctgggtcatg------------------------------------------------------------ 8 Tsco_A_G_1_M1_F1 40.0% -aggctaatctggactggctccctttacatacacatagaggggggtcggcgggggtttttgccgtctgggtcatgt----------------------------------------------------------- 9 Tsco_A_G_2_M1_F1 42.7% -gttaatccttagactggctccctttatatacacatagaggggggtcagcgggggtttttgccgtctggatcatgt----------------------------------------------------------- 10 Tosh_A_G_4_M1_F1 36.0% aagaaaaacctggact-aactcctcttaagacacatagcagggggtaagttcgggcttttgccgtcctggtcaagt----------------------------------------------------------- 11 Tosh_A_G_3_M1_F1 41.3% cttgaaaagttgtcct-ggatcctaaaaagacacatagagggggtccaggggtgttttttgccgtcctggtcaagt----------------------------------------------------------- 12 Ths_0CC_G_1_M7_F1 37.3% -taggggacatggcaattttgcctttctcaaggcttagcgggggtaaaccgagggtttttgctgtgtagatcatct----------------------------------------------------------- 13 Tfus1_A_G_3_M1_F1 0.0% -----------------------------------------------------------------------------------------------acgagaagataacgccctctaaagctgcaggtcatcttct 14 Tfus1_A_G_13_M1_F1 0.0% -----------------------------------------------------------------------------------------------acgaggagataacgcctcgcaaagttgcaggtcagcttct 15 Tfus1_A_G_9_M1_F1 0.0% -----------------------------------------------------------------------------------------------acgcgaagataacagcccacaaaactgcaggtcaacaact 16 Ndas_B_G_13_M1_F1 0.0% -----------------------------------------------------------------------------------------------gcggcgagataacggcccgcgttgccgcaggtcgttaagc 17 Nalb1_A_G_21_M1_F1 0.0% -----------------------------------------------------------------------------------------------gcgggaagataacggcttgcgtttgtgcaggtcattttcc 18 Nalb1_A_G_5_M1_F1 0.0% -----------------------------------------------------------------------------------------------gcgggaagataacggcctctgtttccgcaggtcgttttcc 19 Svir_A_G_5_M1_F1 0.0% ---------------------------------------------------------------------------------------------cagaacgaacaaccgcccttctaaaaccgcaggtcgtgaagg 20 Ndef_G_1_M1_F1 16.1% -----------------------------------------------gcggtaggttttagggacaagaaattgtcctgctacatcaatctcttgtaggaagt-------------------------------- 21 Pmen_A_G_3_M1_F1 16.1% -----------------------------------------------ttggtagatttatagcggctgatttttccttttaggaacagttggttacgctaagt-------------------------------- 22 Rsol_0Po_G_1_M1_F1 16.1% -----------------------------------------------tcggtagatttttgagagccgtttttttgcttttggatcaagggcttgcggtaagt-------------------------------- 23 Goxy_B_G_1_M1_F1 22.8% -----------------------------------------------tcggtagatttttgagggtggaattttcccttttctgtcagtaccttgccaggaaga------------------------------- 24 Csal_A_G_1_M1_F1 14.3% -----------------------------------------------ctggtggaaagatgtcggccgattttgtcctttagaaacaagcgtctatgattaga-------------------------------- 25 Paer_R_G_3_M1_F1 16.1% -----------------------------------------------gcggtagatttttcgaggtgttttttcttctttaaaaacaattctgtacggtaagt-------------------------------- 26 Paer_R_G_2_M1_F1 23.2% -----------------------------------------------ccggtagaattttgctg-ttgtttttctttttttaaaacaatgggatacggtaagg-------------------------------- 27 Malc_A_G_5_M1_F1 21.4% -----------------------------------------------tcggtagaaatttgcaggttgattttctgtttatctaacaatcggttaagataagt-------------------------------- 28 Rsol_0Po_G_2_M1_F1 19.6% -----------------------------------------------tcggtacgttttgggcggtggaatttttggttattaatcaatgggttgtgttaagt-------------------------------- 29 Acry_A_P_2_M1_F1 14.3% -----------------------------------------------tcggtagttctttgacattgtgaattctttagttaaatcagatctttacaggaaga-------------------------------- 30 Gpro_G_3_M1_F1 19.6% -----------------------------------------------ttggtaggcttttgcttgtgtgatttctttcggtagatcaatgatgtgcagtaaga-------------------------------- 31 Tvio1_A_G_2_M1_F1 14.3% -----------------------------------------------ctggtagatttatccgcgcctgattttcttttgaggatcaggtaagtacgggaaga-------------------------------- 32 Avin2_A_G_3_M1_F1 14.3% -----------------------------------------------ttggtagatttctcagcgtctgatttctttttctagatcaggcaagtatgggaagt-------------------------------- 33 Cvio_A_G_2_M1_F1 14.0% -----------------------------------------------tcggtagaattttagatcgggtttttgtctttaaaaatcagtagcttgaaaatggtg------------------------------- 34 Cvio_A_G_3_M1_F1 19.6% -----------------------------------------------tcggtagatttttggggtgggtttttgtctttaaaaatcagcatcttgaaattggt-------------------------------- 35 Kpne_G_1_M1_F1 16.1% -----------------------------------------------ttggtgaattgttgtgtgcttaaaaagctattataaaacagtaatatatctttagt-------------------------------- 36 Ddad_A_G_3_M1_F1 21.4% -----------------------------------------------tcggtgaatttttgtgagtataaaaatagatttgaaaacaataggatatatttagc-------------------------------- 37 Csak_E_G_15_M1_F1 19.6% -----------------------------------------------ttggtaggatgttgttgcgcgaaaaagtgtaataaatacaagtatatagttttaga-------------------------------- 38 Csak_B_G_11_M1_F1 19.6% -----------------------------------------------ttggtgggatgttgttgcctgaaaaagcgtaataaatacagttatatagttttaga-------------------------------- 39 Ecol_AD_G_6_M1_F1 19.6% -----------------------------------------------ttggtgggttgtttttatgggaaaaaatgctttaagaacaaatgtatacttttaga-------------------------------- 40 Efer_A_G_2_M1_F1 19.6% -----------------------------------------------ttggtgggttgtttttatgggaaaaaatgctttaagaacaaatgtatactttgaga-------------------------------- 41 Ecol_H_G_6_M1_F1 17.9% -----------------------------------------------ttggtagattgttgatgcggaataaatttttttaaaaacagttatgtatgcttagt-------------------------------- 42 Ecol_BB_G_4_M1_F1 18.2% -----------------------------------------------ttggtagattgttgatgcggaataaatttgtttaaaaacagttatgtatgcttag--------------------------------- 43 Sson_A_G_5_X_F1 17.2% -----------------------------------------------ttggtagattgttgatgcggaataaatttgtttaaaaacagttatgtatgcttagtgt------------------------------ 44 Ecol_AM_G_2_M1_F1 19.6% -----------------------------------------------ttggtagattgttgatgtggaataaatttgtttaaaaacagatatgtatgcttagt-------------------------------- 45 Ecol_AQ_G_3_M1_F1 21.4% -----------------------------------------------ttggtagattgttgttgtggaataaaattgtttaaaaacagatacgtatgcttagt-------------------------------- 46 Sent_S060_G_1_M1_F1 14.3% -----------------------------------------------ttggtagtttgttatgtagtaaaaaagggcttttagaacaaatatatagttttagt-------------------------------- 47 Sent_0CDC_G_1_M7_F1 14.3% -----------------------------------------------ttggtagtttgttatgtagtaaaaaagggcttttagaacaaatatatagttttagt-------------------------------- 48 Ecol_S_G_6_M1_F1 19.6% -----------------------------------------------ttggtagattgtgactggcttaaaaaatcattaattaataataggttatgtttaga-------------------------------- 49 Ecol_AM_G_3_M1_F1 19.6% -----------------------------------------------ttggtagattgtgactggcttaaaaaatcattaattaataataggttatgtttaga-------------------------------- 50 Ecol_AH_G_3_M7_F1 19.6% -----------------------------------------------ttggtagattgtgactggcttaaaaaatcattaattaataataggttatgtttaga-------------------------------- 51 Ecol_AR_G_5_M7_F1 19.6% -----------------------------------------------ttggtagattgtgactggcttaaaaaatcattaattaataataggttatgtttaga-------------------------------- 52 Ppro2_A_P_1_M1_F1 12.5% -----------------------------------------------ttggtaacttttatgagcttagttttcttcaataaaaacaagtgtatacttttaga-------------------------------- 53 ERWI_G_5_M1_F1 23.2% -----------------------------------------------ctggtagattttaacgggtggaaaaaaccgttacaatttaagtggttggttctaga-------------------------------- 54 Mfla5_A_G_1_M1_F1 14.3% -----------------------------------------------ttggtggaaatgtaggtgttaatttttaattgataaatcaataagttgttttaagt-------------------------------- 55 Czan_G_2_M1_F1 16.1% -----------------------------------------------ttggtagcaagtaacagtttgaaaattacttggtaaatcaattatgtataataaga-------------------------------- 56 Esir_B_G_3_M7_F1 13.6% -----------------------------------------------gcggttgattttgcaaaaccgctattttccttga------------tttctttagt-------------------------------- 57 Csak_B_G_12_M1_F1 16.1% -----------------------------------------------ttggtaggatgtggaaggcgaaaaaatgccattcagtacaaagggttacttttagt-------------------------------- 58 PSEU5_G_2_M1_F1 21.4% -----------------------------------------------gcggtagatttttgcctccccgaataagccttatggttcaaaggtttatttttggt-------------------------------- 59 Rrub1_A_G_9_M1_F1 19.3% -----------------------------------------------tcggtaagttttttgacatcgtgaaaagacatgataatcaacgacttccgtcgatga------------------------------- 60 Zmob_B_G_3_M1_F1 15.8% -----------------------------------------------ttggtagattttttgacatcgtgaatattgtttaatatcaatcccttatcgggatga------------------------------- 61 Gxyl_A_G_3_M1_F1 16.1% -----------------------------------------------ttggtagattctttgacaataaaatatgcttttggaatcaataggttccaggaaga-------------------------------- 62 Gxyl_A_G_2_M1_F1 16.1% -----------------------------------------------ttggtagaatctttgacagtaaaataatcttttggaatcaatgagttccaggaagt-------------------------------- 63 Dole_A_G_9_M1_F1 10.7% -----------------------------------------------ccggtagaaaaaacaaactgcaaaaatacttctaaaaacaaaaagttcgaggaagt-------------------------------- 64 Epyr_DS_G_2_M1_F1 19.6% -----------------------------------------------ttggtagaaatatggagtggtaaaaaactttctaagatcagtgagatagttttaga-------------------------------- 65 Rpho_0B_G_5_M1_F1 12.5% -----------------------------------------------tcggtgcgctgattgacatcagaaagagcctatgattacaatcctttccaggaaga-------------------------------- 66 Glov_A_G_1_M1_F1 23.2% -----------------------------------------------ttggtaacattttggtctttgaaaattgctcgtgatttcatataactgcaacaagt-------------------------------- 67 Pcar1_A_G_1_M1_F1 21.4% -----------------------------------------------ttggtgcagtttttcggtctttgaaaacctaatattttcatgtgcttaaaaatagt-------------------------------- 68 Goxy_B_G_2_X_F1 17.5% -----------------------------------------------tcggtagctttttgaagtggaagatttgcacccataatcatatacttacaaacaagg------------------------------- 69 Kvar1_A_G_2_M1_F1 16.4% -----------------------------------------------ttggtgaattgtttttcagttaaaagctattgatattgaagtctatttttttagt--------------------------------- 70 Dala_0G2_G_1_M1_F1 19.6% -----------------------------------------------agggtagttctattcgctcttattttagcgtagcatttcaatgtgttacaaaagga-------------------------------- 71 Dalk2_A_G_2_M1_F1 20.0% -----------------------------------------------ttggccagtagtgggtcattttaattggccattaacagaa------------------------------------------------ 72 Tfus1_A_G_4_M7_F1 3.4% -----------------------------------------------gtggcgggacgctgg-------------ctggtagttcggattagctatcactaaggagcagcgtgctcagggcgttcctcgcagcaa 73 ROSE2_G_7_M1_F1 22.7% ---------------------accgtcctgatgcggaacatgacttcgaggcttgtttttggaggcgaatcgcattagaatgcctgagacgcaagt--------------------------------------- 74 Ppro_A_G_2_M1_F1 17.9% -----------------------------------------------ttggtggctgtttaatgaatgaaatagctcaattattttgaggaaatagaggaagt-------------------------------- 75 Gura_A_G_1_M1_F1 17.9% -----------------------------------------------tcggtggaatttatgcagttgaatttgcttaatgattttgaggaagtagaggaagt-------------------------------- 76 Sthe3_A_G_5_M1_F1 13.1% -----------------------------------------------gtggtagacttcgacggcctgacattgatccgagtgccgtcagaatgaggaaaatggaagt--------------------------- 77 SYNE12_G_1_M1_F1 11.5% -----------------------------------------------ctagtagacatagaaggggtgctgctggtcaaaacctactaaaatcggcaaaaatggaagg--------------------------- 78 CYAN3_G_10_M1_F1 13.1% -----------------------------------------------ctagtagacatagaggggttgctcctggttagaacccgctgaattcttttattctggaagt--------------------------- 79 Bani_C_G_4_M1_F1 11.9% -----------------------------------------------tgagcggagtgtgcaaatccaatcttttgacatagtcgagagagtgttttgccagtaaagtcggact--------------------- 80 Dgob_A_P_8_M1_F1 24.6% ----ttagatgcacaagggatacttctaggtcttgtgtacaagattggccacgtatttctgaagt---------------------------------------------------------------------- 81 Dgob_A_P_1_M1_F1 26.2% --------------------------ccgcctatgggcctgcgccttacggcggattgacgctaggaaaagagcgtagttctgaagt------------------------------------------------ 82 Pami_J_G_3_M1_F1 14.3% -----------------------------------------------tcggtaggatttgcggtagacgaaaagcattggtagaacaggtgcttgcaacaaga-------------------------------- 83 Sfum1_A_G_19_M1_F1 14.3% -----------------------------------------------ctggtaagtgtctgcgtgctcgaaaataaacgtcatatcaaagtgttggaagaagt-------------------------------- 84 Acry_A_P_1_M1_F1 17.9% -----------------------------------------------tcggtggaatggcgcctatggaaactcttgttccatatcatatggttacaggaaga-------------------------------- 85 Dgeo_A_P_1_M1_F1 0.0% --------------------------------------------------------------------------ccgggcgggcagaggggacttctccgggggtgacggccaaagaaggctatgtttatgaagt 86 Ddes_B_G_2_M1_F1 22.8% -----------------------------------------------ttggtagatttgtgatgtttctgtaacgcgctgatttagtatttgtatttatgaaga------------------------------- 87 Trad_A_G_10_M1_F1 31.0% -----agaaccttgacaacgagacctcttggatacttccgagcccttttcgcgcgtttttagcgtctgggtctagt----------------------------------------------------------- 88 Blon1_G_G_3_M1_F1 11.9% --------------------------------------------------ccggttgcgtgggatccccgttacttcgattctaccatacgc------------------------------------------- 89 Dtie_DS_G_3_M1_F1 10.7% -----------------------------------------------ttggtaaccctggcgaggtgaaaaatcctcaatggttctcgaggcctatcaatagt-------------------------------- 90 Rgel_0IL_G_1_M1_F1 17.5% ------------------------------------ggggtcagttctcaatgacgccaggggggcagttttgcgtgtcgcccaacaacccatttcgca------------------------------------ 91 Bast_A_G_1_M7_F1 7.6% -----------------------------------------------atgcaaactcattaaaaatcagaaatcttggttattgtattgttgggattgcaaggatttctaagt---------------------- 92 Bani_H_G_2_M7_F1 10.6% -----------------------------------------------aagagaagtgaataaaaacagacttccttcttttctgatatgttgagattattgggatttcttagt---------------------- 93 Sent_N_G_2_M1_F1 9.2% -----------------------------------------------gcggtgccaccctcggctttaattgtgttccccgcgccgacgcgttccagcgcacgttactcgat----------------------- consensus/90% ...............................................sssssssssssssssss..........s............................................................ |
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