Reference sequence (1): Ckri_A_G_3_M13_F2 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 [ . . . . : . . . . 1 . . . . : . . . . 2 ] 210 1 Ckri_A_G_3_M13_F2 100.0% -----------------taccaactccttac-aaaacccaaccaccc------------cctcgctgcaat-------------t-----catttttgttgagaagattttg---------------------ctaatgggttataataaagatatagcatagaaaagatgatattttttattaatgg---------------------- 2 Cobs_A_G_1_M13_F2 75.8% -----------------tgctattttattacaaaaacccaactatcc------------cctcgctgcaat-------------t-----tattcttattgtggaaaatttg---------------------ctgatagggtataatatagatgtaagatgggaaaagggatatttattattaatgg---------------------- 3 Tmat_B_G_1_M13_F2 53.3% ------------------taacaaaaaatgctaaatccagaccaccc------------cttcgctgcaaa------------------tcatccttgttgcaaataatttt----------------------gaatttagtataattgtagatgatatctgaatttaatagttctgttattaaagtgg-------------------- 4 Ckri_A_G_9_M13_F2 36.2% ------------------tggaacatattgccaaatcataaccacct------------ctttgctgcaaa-------------------aattaatattgacagacatttt-------------------------------------------aaattttaataaaatcaaagtaaaatctaagcaagaaggaatttcagatttaatg 5 Chyd1_A_G_1_M13_F2 44.0% ------------------taccattttcaaccaattctcaaccatac------------ctttgctgcaaa-------------ct----tttatttattgcaataaatttg--------------------------taaatgctttataatctaattatatcaataaatgaggtaatttttattttagtgg----------------- 6 Bcer1_A_G_3_M13_F2 23.9% -----------------tttgaaaatgcatatgaaacaaaactaaca------------gtgtgctgcaaa---------------------------------------------------------------------------actttcagtgtattatataataaatgtattgattttaaagagaattatggtgattttttatagg 7 Cper2_D_G_1_X_F2 36.0% -----------------ttttattgatacactaaaacattactgatg------------gtctactgcaaa-------------at----tttaatatttatgataaaatta-------------------------------acaatagagaatgagtctattactagcttttagcattttgaaatttggg------------------ 8 Cdif1_B_G_5_X_F7 23.7% -----------------tgataaactttatcatttgcactactcatg------------gttcactgcaaatttaagagagttgcacatgtgtaagtattgaaaatgcccag--------------------------------------------------------------tttattttggg------------------------- 9 Cdif1_B_G_10_X_F7 27.4% -----------------tgataaatgttatcaattgcactactcatg------------gttcactgcaaatttgagagagttgtatgtgtgtaagtactgaaaatacttag--------------------------------------------------------------tttattttggg------------------------- 10 Cdif1_A_G_12_X_F7 27.4% -----------------tgataaatgttatcaattgcactactcatg------------gttcactgcaaatttgagagagttgtatgtgtgtaagtactgaaaatacttag--------------------------------------------------------------tttattttggg------------------------- 11 Cdif_C_G_13_X_F2 25.9% -----------------tgataaatgttatcaattgcactactcatg------------gttcactgcaaatttaagagagttgtatatgtgtaggtattgaaaatactcaa--------------------------------------------------------------cttattttggg------------------------- 12 Cdif_E_G_25_X_F7 25.9% -----------------tgataaatgttatcatttgcactactcatg------------gttcactgcaaatttgagagaattgtatagatgtaagtgttggaaatactcaa--------------------------------------------------------------tttattttggg------------------------- 13 Cdif1_B_G_8_X_F2 24.4% -----------------tgataaatgttatcaattgcactactcatg------------gttcactgcaaatttgagagagatgcgtatgtgtaggtattggaaatgccaag--------------------------------------------------------------tttattttggg------------------------- 14 Cdif_G_G_6_X_F2 27.4% -----------------tgataagcgttatcaattgcactattgctc------------gttcactgcaaatttaagagagttgtatacgtgtaagtattgaaaatactaag--------------------------------------------------------------tttattttggg------------------------- 15 Cdif_C_G_16_X_F2 29.6% -----------------tgataactgttatcaattgcactattgctc------------gctcactgcaagtttaggagaattgtatatgtataagtattggaaatacttaa--------------------------------------------------------------tttattttggg------------------------- 16 Cdif_B_G_6_X_F7 27.4% -----------------tgataagtgttatcatttgcaccactgctc------------gctcactgcaaattttagagtgttgcatatgtgtaagtgttggaaatgctaag--------------------------------------------------------------tttattttggg------------------------- 17 Cdif1_A_G_13_X_F2 29.6% -----------------tgataagtgttatcaattgcactattgccc------------cctcactgcaattttaagagtattgtatatatgtaggtattggaaatgctaag--------------------------------------------------------------tttattttggg------------------------- 18 Cdif_A_G_10_M13_F7 25.9% -----------------tgataagtattatcaattgcaatattgcgc------------gttcactgcaattttaagagcattgtatatgtgtaaacattggagatgctaag--------------------------------------------------------------tttattttgga------------------------- 19 Cdif_E_G_14_X_F2 28.1% -----------------tgataagtgttatcaattgcactattaccc------------gctcactgcaaatttgagaaagttatatgtgtgtaagtcttggaaatacacaa--------------------------------------------------------------tttattttggg------------------------- 20 Pmar6_A_G_2_X_F2 29.4% -------tgataataagtataat-----------tgcattactacag------------ctttgatgcaga-------------tt----acttatttttgcaaagatgtat-----aaaagtagaatgatccttctctaaatagctttatagcttgccaaatcactatatttttttatatcgttagaatgatgg--------------- 21 Pmar6_A_G_4_X_F2 27.5% -------tgctaataagtataat-----------tgcattactacag------------gtttaatgcaga-------------tt----acttatttttgcaaagatgtat-----agaagcggaatgatctttctctaaatggctttataacttgctaaatggct-tatttttttatatcgatagaatagtgg--------------- 22 GEOB4_G_4_X_F7 33.1% -----------------atttgcgcagcatagaaaacacaattacta------------ctttactgcaaa-------------atgaggtataattgttgtgtaggcatta----------------------------------gccggaattccttgttacatcaatgaatattgctttgtaactgatagggg-------------- 23 Sazo_A_G_4_M13_F2 28.2% -------taatagaaaatatatttgcattatgtgagctacgatgca-------------attaacctcaat---------------------------ttgcgagtggttaa---------cgaaaataaaaattacctgcaaatcagcgtcattacttgattatttaaatttttttatttttaaaaattaacgg--------------- 24 Sazo_A_G_3_M13_F2 28.9% -------taacagaaaatatatttgcattatgtgagctacgatgca-------------gttaacctcaat---------------------------ttgcgagcggttaa---------cgaaaataaaaactacctgcaaatcagcgtcattacttgattatttaaatttttttatttttaaaaattaacgg--------------- 25 Cexi1_A_G_2_M13_F2 26.5% --------------------gattagcgggtcgatgcaaaaatgacctccgttaaatgacttttatacaaa-------------aa----ttttacttttatgatataatta-----taaaaaatatgtaa----acgttaatgccatcaggcttagcttaccttgaaaattatgctatttttaaaaaggg------------------- 26 HYDR2_G_6_X_F12 34.7% -----------------aacggtacactaaactttgcagaatctggc------------attttcggaaaa-------------tt----accttcatttgcgaggggt--------------------acccccttgacaaaaccattgatacactatataatattaggagtagtgatttctg-------------------------- 27 HYDR2_G_5_X_F12 34.7% -----------------aacggtacactaaactttgcagaatctggc------------attttcggaaaa-------------tt----accttcatttgcgaggggt--------------------acccccttgacgaaaccattgatacactatataattttaggagtagtgatttctg-------------------------- 28 HYDR4_G_4_X_F12 33.9% -----------------aacggtacactaaactttgcagaatctggc------------attttcggaaaa-------------tt----accttcatttgcgggggggt-------------------acccccttgacaaaaccattgatacactatataatattaggagtagtgatttctg-------------------------- 29 Dthe6_A_G_2_M13_F2 34.3% ------------------ttttgtacctacaaaaaatcctatccagg------------ggttactgcaaa-------------------aaattctcttacaagagtctat-------aatcataagaatttttaagcaaaaacaaaagtaatttacttatgttataattaaaagtactcataaatattaacgctgg------------ 30 Tyel_A_G_5_X_F2 36.4% -----------------ttttggacattttttaaaaattgattaaag------------gtctgatgcaaa-------------t-----aacttgttttttgagggggttc-------tcagatgcgataatttttttgtaaaatttagaaatataaagaattttgggagcaattcattgttcattgacaagctgg------------- 31 Cnit_A_G_2_X_F2 30.6% -----------------tttcaaaaaattctaaaaaatcaactaaag------------gttcgatgcaaaaaaattaaaattttcgggggttgatttttttaaaaaatttt-----------------------------------------attaacatattaatatagtaagcaaatttaatatgtaaacagcaccatgatatttgg 32 Tamm_A_G_5_X_F2 25.5% -----------------tattagactatcatcataaacttaatggag------------gtccgctgcact-------------------taacccctcttccgccggtttg-------------------------------------------ctataatgagaaaagtgttgcagttctttaacttgggaatatggccgaaggttg- 33 Tamm_A_G_8_X_F2 29.8% -----------------tattagattattatcataaacttaatggag------------gtccgctgcact-------------------taaccctctcttcaccaatttg-------------------------------------------ctataatgagaaaagcattgcagttctttaacttgagaatatggccaaaggttg- 34 Afla_A_G_3_M13_F2 30.7% --------------------------------------------------------------------------------------------------tcgcaaacattttg-----cgcagtatttccgattttcatccaaaataatttgaaaaagtagttctggaatagtgtgctaatttacactacaa------------------- 35 SULF_G_3_X_F12 25.5% -----------------ttctgtatatcgaggtttgcggaaaaaaacttcaacttgccgatttcttaaaaa--------------tttggtataatagttatcagaatattg-----------------------------------------atagagtaaggtataagcgattttatttttgattaaaaatttaacgg---------- 36 SULF_G_6_X_F12 19.4% tataaattcaagaaaaccggaattttcccaaactggtatgacctatacatcaacttgcggatttttttaaa-------------atttggtataatgttttatacattgtta-----------------------------------------attgaataaggtttttacgaatttacttttgagttaaaagttgacg----------- 37 Lrum_0C_G_3_X_F2 22.6% -----------------tactgatgttcgagcatattatatatcaaataagcttcaaatttttattgcatt----------------------------------------------------------------------gacagaaatacgcttaagatatatagtggtgttagtattttcaaactatgga----------------- 38 Pmar6_A_G_5_X_F2 26.1% -----------------------------gcaagatcctcttccctaatgtttgtaatatttaactgcaaa--------------cctctattgtatgatgcaattaaacttccattatcagaaattatatatgtcccaacctgctgtaaggactcgttcagtggaatactggtcttgtttacg-------------------------- 39 Cdif_G_G_9_X_F7 20.0% --------tttcaagaatatgcagagatactaagagaaatacttaga-------------------------------------------------------gaacaagaagagagaaaaaataagtaaaataatatggataaagcacttggatattatgttgtttcaagtgctttatttggtaaaaaatggtataatataggtagga-- consensus/90% ..................sssss......ss.ssssssssussssss............sssssssssAss...........................sssssusssss.................................................................sssusTssss.......................... |
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