CRISPRleader - An efficient tool to determining CRISPR leader boundaries

Synopsis

CRISPRleader takes a complete genome or draft genome as input and selects all possible CRISPR arrays in the correct orientation, and annotates the CRISPR leader boundaries.

Publication

Omer S. Alkhnbashi, Shiraz A. Shah, Roger A. Garrett, Sita J. Saunders, Fabrizio Costa, Rolf Backofen.
Characterizing leader sequences of CRISPR loci . Bioinformatics, 32(17) i576-i585, 2016.

Download

Latest Release: CRISPRleader1.0.3.tar (September 2016)

Older release is available by request.

Multiple sequence alignments for archaeal and bacterial clusters MSA.1.0.2.tar

Installation and Usage

Instructions on installation and usage can be found with file "README.txt" included with CRISPRleader.

Problems/Questions?

For any questions or issues concerning CRISPRleader please write an email to: email as png