@Article{Wallach_Raden_Hinkelmann-Disti_SARS_RNA-2022, author = {Wallach, Thomas and Raden, Martin and Hinkelmann, Lukas and Brehm, Mariam and Rabsch, Dominik and Weidling, Hannah and Kruger, Christina and Kettenmann, Helmut and Backofen, Rolf and Lehnardt, Seija}, title = {Distinct {SARS}-{CoV}-2 {RNA} fragments activate {Toll}-like receptors 7 and 8 and induce cytokine release from human macrophages and microglia}, journal = {Front Immunol}, year = {2022}, volume = {13}, number = {}, pages = {1066456}, user = {backofen}, pmid = {36713399}, doi = {10.3389/fimmu.2022.1066456}, issn = {1664-3224}, abstract = {INTRODUCTION: The pandemic coronavirus disease 19 (COVID-19) is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and is marked by thromboembolic events and an inflammatory response throughout the body, including the brain. METHODS: Employing the machine learning approach BrainDead we systematically screened for SARS-CoV-2 genome-derived single-stranded (ss) RNA fragments with high potential to activate the viral RNA-sensing innate immune receptors Toll-like receptor (TLR)7 and/or TLR8. Analyzing HEK TLR7/8 reporter cells we tested such RNA fragments with respect to their potential to induce activation of human TLR7 and TLR8 and to activate human macrophages, as well as iPSC-derived human microglia, the resident immune cells in the brain. RESULTS: We experimentally validated several sequence-specific RNA fragment candidates out of the SARS-CoV-2 RNA fragments predicted in silico as activators of human TLR7 and TLR8. Moreover, these SARS-CoV-2 ssRNAs induced cytokine release from human macrophages and iPSC-derived human microglia in a sequence- and species-specific fashion. DISCUSSION: Our findings determine TLR7 and TLR8 as key sensors of SARS-CoV-2-derived ssRNAs and may deepen our understanding of the mechanisms how this virus triggers, but also modulates an inflammatory response through innate immune signaling.} }