@article{Raden-2018-websrv,
author = {Raden, Martin and Ali, Syed M and Alkhnbashi, Omer S and Busch, Anke and Costa, Fabrizio and Davis, Jason A and Eggenhofer, Florian and Gelhausen, Rick and Georg, Jens and Heyne, Steffen and Hiller, Michael and Kundu, Kousik and Kleinkauf, Robert and Lott, Steffen C and Mohamed, Mostafa M and Mattheis, Alexander and Miladi, Milad and Richter, Andreas S and Will, Sebastian and Wolff, Joachim and Wright, Patrick R and Backofen, Rolf},
title = {{Freiburg} {RNA} {tools}: a central online resource for {RNA}-focused research and teaching},
journal = {Nucleic Acids Research},
volume = {46},
number = {W1},
pages = {W25-W29},
year = {2018},
doi = {10.1093/nar/gky329},
issn = {0305-1048},
issn = 	 {1362-4962},
user = {mmann},
abstract = {The Freiburg RNA tools webserver is a well established online resource for RNA-focused research. It provides a unified user interface and comprehensive result visualization for efficient command line tools. The webserver includes RNA-RNA interaction prediction (IntaRNA, CopraRNA, metaMIR), sRNA homology search (GLASSgo), sequence-structure alignments (LocARNA, MARNA, CARNA, ExpaRNA), CRISPR repeat classification (CRISPRmap), sequence design (antaRNA, INFO-RNA, SECISDesign), structure aberration evaluation of point mutations (RaSE), and RNA/protein-family models visualization (CMV), and other methods. Open education resources offer interactive visualizations of RNA structure and RNA-RNA interaction prediction as well as basic and advanced sequence alignment algorithms. The services are freely available at http://rna.informatik.uni-freiburg.de.}
}